Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0184 ATGTCCACTCTACTTCAATCTTCTTTCATTTCTTCTTCTTCTTCCTCCTTCTCTCCGATAACTCCTCGTTTCTCCCTCCGCTACGCTGCCGCCGTCAGATGTAATAATGTAGTACAATCTGTCAATCTAGAAAACGGAAAACCGTACCGTTCAACTGAATATTCAGTTACCGGTGGTACAAGTTCAATTCCGAGTTATCTAGTCGCGCCAAACACTCGTATTCATGATCTTGTTAACAAGAATCGTCTTCGTATTTTCTCCGGCACCGCTAATCCCGCACTCGCTCAGGAAATTGCATGCTATATGGGCCTGGATTTGGGAAAAATTAAGATAAAACGTTTTGCCGATGGGGAGATATATGTCCAACTGCAAGAGAGTGTCAGGGGGTGTGATGTGTTTCTTGTGCAGCCTACATGTCCTCCCGCGAATGAGAATCTTATGGAGCTTCTTGTAATGATTGATGCCTGCAGGAGAGCTTCTGCCAAAAATATTACTGCAGTCATTCCCTATTTTGGATATGCTAGAGCTGATAGAAAGACTCAAGGGCGTGAATCAATTGCTGCTAAGCTTGTAGCAAATTTAATTACTGAAGCTGGTGCAAATCGTGTTCTTGCATGTGACCTCCACTCTGGGCAGTCTATGGGATACTTCGATATTCCAGTTGATCATGTGTATGGACAGCCTGTTATACTCGATTACCTTGCAAGCAAGACTATTTGTTCAGATGATTTGGTAGTTGTCTCGCCAGATGTTGGTGGTGTAGCTCGAGCACGTGCTTTTGCCAAAAAGTTATCTGATGCTCCTTTAGCGATCGTTGATAAAAGACGTCATGGGCATAATGTTGCCGAGGTGATGAATTTGATAGGTGATGTAAAAGGAAAGGTAGCAGTGATGGTAGATGACATGATTGATACTGCTGGGACCATCGCCAAAGGAGCAGCTCTTTTGCATCAAGAAGGGGCAAGAGAAGTCTATGCATGCACAACACATGCTGTTTTCAGCCCGCCTGCTATAGAGAGATTGTCAAGTGGTTTATTTCAAGAAGTTATCATAACTAATACAATTCCAGTGGCAGAGAAGAACTACTTCCCCCAATTAACTGTCTTATCAGTAGCAAACCTTCTGGGCGAGACCATATGGCGTGTTCATGATGACTGCTCAGGTGGAATTGAACCTTATTCCAGTTTGGGCATTGATTGA 1200 0.4358 MSTLLQSSFISSSSSSFSPITPRFSLRYAAAVRCNNVVQSVNLENGKPYRSTEYSVTGGTSSIPSYLVAPNTRIHDLVNKNRLRIFSGTANPALAQEIACYMGLDLGKIKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPANENLMELLVMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQPVILDYLASKTICSDDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACTTHAVFSPPAIERLSSGLFQEVIITNTIPVAEKNYFPQLTVLSVANLLGETIWRVHDDCSGGIEPYSSLGID* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0184 399 Hamap Putative ribose-phosphate pyrophosphokinase [prs]. 83 393 IPR037515 GO:0004749
Mtr8g0184 399 TIGRFAM ribP_PPkin: ribose-phosphate diphosphokinase 84 386 IPR005946 GO:0000287|GO:0004749|GO:0009165
Mtr8g0184 399 CDD PRTases_typeI 242 354 IPR000836 -
Mtr8g0184 399 SMART Pribosyltran_N_2 83 199 - -
Mtr8g0184 399 PANTHER RIBOSE-PHOSPHATE DIPHOSPHOKINASE-RELATED 52 398 - -
Mtr8g0184 399 Gene3D - 86 384 IPR029057 -
Mtr8g0184 399 SUPERFAMILY PRTase-like 148 384 IPR029057 -
Mtr8g0184 399 Pfam Phosphoribosyl synthetase-associated domain 284 387 IPR005946 GO:0000287|GO:0004749|GO:0009165
Mtr8g0184 399 ProSitePatterns Phosphoribosyl pyrophosphate synthase signature. 207 222 IPR000842 GO:0000287|GO:0004749|GO:0009156|GO:0044249
Mtr8g0184 399 PANTHER RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER 52 398 IPR005946 GO:0000287|GO:0004749|GO:0009165
Mtr8g0184 399 Pfam N-terminal domain of ribose phosphate pyrophosphokinase 83 199 IPR029099 -
Mtr8g0184 399 Gene3D - 226 369 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0184 Mtr-Chr8 2199070 2206016 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0184 K00948 - gmx:100816430 676.011