Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0179 ATGGATTATGGTTACAACGTTAGAAAGTTGTCTATAAATAAAGTCATATGCATGTACTCCAAAACACACACACACACACAAAAGGAAAACACTTGTGCTTCTACGATAATGGCATCAAGGCCTGGAATCCTCACTGATTGGCCATGGAAGCCTCTTGGAAGCTTTAAGTATGTGGTACTAGCTCCTTGGGTGATTCACAGCACATATTCTTTGATAGTGAAGGATAAGAGTGAAAGGGATGTATCTACATTTCTCATATTTCCATTTTTGCTATGGCGTGTTCTTCATAATCAGATATGGATATCTCTCTCTCGTTATAGAACTTCCAAAGGCAACAATAGAATTCTTGACAAGGGAATTGAGTTTGATCAAGTTGATAGAGAAAAAGATTGGGATGACCAAATATTGTTCAATGGGTTACTATATTATTTGGCATGCTATACATTGGAAGGAGCATCACGTCTTCCATTATGGAGAACTGATGGAGTGATTATTGCAATATTGCTTCATGCTGGAGCAGTTGAATTTCTTTATTATTGGTTACACAGAGCACTTCATCATCATTTCCTCTATTCTAGATATCATTCTCATCATCATTCTTCCATTGTTACGGAACCAATCACCTCTGTCATTCATCCATTTGCTGAACATATATCATATTTCCTTCTATTTGCAATACCCAAGTTAACCCTTGTCTTCACAAATAGAGCTTCTATTGGAGCAATGGTTGGATATGTCACTTATATTGATTTTATGAATAACTTGGGTCACTGCAACTTTGAGATTGTTCCTAAGTGGCTCTTTGATATCTTCCCACCTCTCAAGTATCTCATGTACACCCCATCGTTTCACTCATTGCACCATACTCAGTTTAGAACAAACTACTCACTCTTCATGCCACTTTATGACTACATTTATGGAACAATGGACAAGGCTTCAGATGAGTTGCATGAGTCAACATTAAAAAGAAAGGAAGAGACACCAAATGTTGTCCACTTAACACATTTAACAACCCCAGAATCCATTTATCATCTAAGATTTGGATTTGCTGCCTTGGCTTCTAAGCCATACACATCTAAGTGGTACCTTTGGTTGATGTGGCCTTTTACAGCTTGGTCCATGTTCCTCACATGGGTCTACGGCCGCACATTCATTGTTGAAAGAAACCGTTTTGATGACAAACTTAACCTTCAAACTTGGGCAATACCCAAGTACAGTGTTCAGTACTCACGGCAATGGCAAAAAGTGTCTATCAACAAAATGATTGAGGAAGCAATACTGGATGCTGACAAAAAGGGCATAAAAGTGGTGAGTCTAGGTCTAATGAATCAAGAGGAAGAGCTTAACATCTATGGAGGCTTATATGTTAGTAGGCATCCAAAGCTTAATGTTAAGGTTGTAGATGGTAGTAGCCTTGCTGTTGCAGCTGTTATTAACAGCATTCCAAAAGGAACAACTCAAGTATTACTCAGAGGAAAACTCACCAAAGTTGCTTATGCTCTTGCCTACACATTGTGCCAACAAGGAGTTCAGATAGCTACAATGAATGACGATGATTATGTGAAGCTCAAAAAGGCATTGATGCACAGCTCTCATTCAAATATTGTCAATGCAAAAAGTTTCACTCAGATGATTTGGTTAGTTGGAGATGGATTGACTGAAGAGGAACAGTTGAAGGCACCAAAAGGAACATTATTTATTCCATACTCACAATTCCCACCAAAGAAACACCGCAAAGACTGCTTATACCATTACACTCCTGCAATGCTCACTCCCACTTCTATTGAAAATGTCCATTCTTGTGAGGATTGGTTGCCAAGGAGGGTAATGAGTGCATGGCGTGTAGCTGGGATAGTGCACTGCTTAGAAGAATGGAATGAACATGAGTGTGGCTACAACATGATTAACATGGACAAAGTTTGGCCTTCAGCTCTTAAACATGGATTCAAACCTCTCACTGTTCCCCTCAAAAAATGA 1977 0.39 MDYGYNVRKLSINKVICMYSKTHTHTQKENTCASTIMASRPGILTDWPWKPLGSFKYVVLAPWVIHSTYSLIVKDKSERDVSTFLIFPFLLWRVLHNQIWISLSRYRTSKGNNRILDKGIEFDQVDREKDWDDQILFNGLLYYLACYTLEGASRLPLWRTDGVIIAILLHAGAVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSVIHPFAEHISYFLLFAIPKLTLVFTNRASIGAMVGYVTYIDFMNNLGHCNFEIVPKWLFDIFPPLKYLMYTPSFHSLHHTQFRTNYSLFMPLYDYIYGTMDKASDELHESTLKRKEETPNVVHLTHLTTPESIYHLRFGFAALASKPYTSKWYLWLMWPFTAWSMFLTWVYGRTFIVERNRFDDKLNLQTWAIPKYSVQYSRQWQKVSINKMIEEAILDADKKGIKVVSLGLMNQEEELNIYGGLYVSRHPKLNVKVVDGSSLAVAAVINSIPKGTTQVLLRGKLTKVAYALAYTLCQQGVQIATMNDDDYVKLKKALMHSSHSNIVNAKSFTQMIWLVGDGLTEEEQLKAPKGTLFIPYSQFPPKKHRKDCLYHYTPAMLTPTSIENVHSCEDWLPRRVMSAWRVAGIVHCLEEWNEHECGYNMINMDKVWPSALKHGFKPLTVPLKK* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0179 658 PANTHER FATTY ACID HYDROXYLASE SUPERFAMILY PROTEIN 37 655 - -
Mtr8g0179 658 Pfam WAX2 C-terminal domain 488 651 IPR021940 -
Mtr8g0179 658 Pfam Fatty acid hydroxylase 168 308 IPR006694 GO:0005506|GO:0008610|GO:0016491
Mtr8g0179 658 PANTHER STEROL DESATURASE 37 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0179 Mtr-Chr8 2133755 2145376 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0179 37 652 Lipid Metabolism Gene Families AT1G02190 57.624 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0179 K15404 - gmx:100818020 1085.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0179 8 2133755 2145376 Mtr8g0179 8 2133755 2145376 ECH