Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0178 ATGGCGTCCAAACCTGGCATACTTACTGATTGGCCATGGACACCTCTTGGGAGATTCAAGTGGGTGATTTTGACACCATTCATAGCAAAGAGCACATACAATTTCATTGTGAATAGTCCAGAGGAAAAGGACCTTAGTAACTTCCTCATCTTCCCATATATGATGGTGAGGATGCTACATGACCAAGTTTGGATCTCTTTATCTCGCCATCGAACCGCCAAAGGAAAAAACAGAATCGTCGACAAGGCAATCGAGTTTGAACAAGTTGATCGAGAAAGCAATTGGGATGATCAAATATTGTTCAATGCATTGATATTTTATATTGGTCAATGGCTGGTTCCAGAGTCTCAGAAATTGCCCATATGGAGAACAAGTGGTGTGGTTATGACAATTCTTTTACATAGTGGACCAGTGGAGTTTCTTTACTATTGGTTACACAGAGCACTTCATCATCATTTCCTCTATTCTAGATATCATTCTCATCATCATTCTTCCATTGTTACAGAACCAATAACTTCTGTGGTACATCCATTTGCAGAACACATAGCTTACTTTTTGCTATTCGCCATTCCATTATACACAACAGCAATTACAAACACAGCATCCATAGCATCCTTTGCTGGTTATCTTGCTTACATTGATTTCATGAATAATTTGGGTCACTGTAATTTTGAGTTCATTCCTAAGAAAGTCTTCTCCATCTTTCCATTCCTCAAGTATACCATGTATACACCATCGTTCCACTCATTGCATCATACACAATTTCGGACTAATTATTCACTATTCATGCCAATTTATGATTACATCTATGGAACTGTTGACAAGGCTTCAGACACATTATATGAAAATTCATTGAAGAAAGAAGAAGGTACACCAGATGTGGTACATTTGACACACCTTACAACTCCTGAATCCATATATCAACTAAGATTGGGATTTTCTTCCTTAGCCTCCTCACCCCAATCTTCTGAATGGTACCTTTATTTCATGTGGCCTTTCACTTTTTGGTCTGTTCTTGTCACTTGGTTTTATGGCAAAACATTTGTTCTTGAGAGGAACTCTTTTAATATGCTCAATTTGCAATCATGGGTTATTCCAAGATTCCATGTTCAATATCTTTTTAAATGGCAAAGAGAAACATTGAATAAACTTATAGAAGAAGCAATACTTGAAGCTGAGTTGAGCAAAGTTAAGGTTTTAAGTTTAGGTCTTTCAAACCAGGGAGACTTGCTCAATAGATATGGTGAACTATACATCAAAAGGTATCCCCAACTTAAGATGAAGATTGTTGATGGCAGTAGTTTGGTTGTGGCTATTGTTCTTAATAGCATTCCAAAAGAAGAAAATCAAGTTTTTCTTTGTGGTAGACTTGACAAGGTTTCATATGCCATAGTTAATGCTTTATGTGAAAGGGGTACCAAGGTTACAACAATGTATAGAGATGATCATGAGAATCTTCAGTTACGGCTATCCTCGAAATCCCAAAAGAATTTGGTTTTCCCAGGATCAAATTCTGCTAAGATATGGCTAGTTGGAGATCAATGTGAGGAGGTAGAACAAAAAAAGGCACCAAAAGGATCATTGTTCGTACCATTTTCCCAATTCCCTCCAAAGAAATTTCGAAAAGATTGCTTCTATCTTAGCACACCAGCCATGATAACTCCCCCTAATTTAGCCAATGTCCACTCTTGTGAGAATTGGCTTCCAAGAAGAGTCATGAGTGCATGGCGTATTGCTGGAATATTGCACGCTTTGGAAGGTTGGGACGTTCATGAATGTGGAGAAGTGATGTTTAGCATTGACAAAATATGGCAAGCAAGTCTTCAACATGGGTTTAGACCATTGAAGATTAGTCATCCCATTGATTGA 1869 0.3788 MASKPGILTDWPWTPLGRFKWVILTPFIAKSTYNFIVNSPEEKDLSNFLIFPYMMVRMLHDQVWISLSRHRTAKGKNRIVDKAIEFEQVDRESNWDDQILFNALIFYIGQWLVPESQKLPIWRTSGVVMTILLHSGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSVVHPFAEHIAYFLLFAIPLYTTAITNTASIASFAGYLAYIDFMNNLGHCNFEFIPKKVFSIFPFLKYTMYTPSFHSLHHTQFRTNYSLFMPIYDYIYGTVDKASDTLYENSLKKEEGTPDVVHLTHLTTPESIYQLRLGFSSLASSPQSSEWYLYFMWPFTFWSVLVTWFYGKTFVLERNSFNMLNLQSWVIPRFHVQYLFKWQRETLNKLIEEAILEAELSKVKVLSLGLSNQGDLLNRYGELYIKRYPQLKMKIVDGSSLVVAIVLNSIPKEENQVFLCGRLDKVSYAIVNALCERGTKVTTMYRDDHENLQLRLSSKSQKNLVFPGSNSAKIWLVGDQCEEVEQKKAPKGSLFVPFSQFPPKKFRKDCFYLSTPAMITPPNLANVHSCENWLPRRVMSAWRIAGILHALEGWDVHECGEVMFSIDKIWQASLQHGFRPLKISHPID* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0178 622 PANTHER STEROL DESATURASE 1 617 - -
Mtr8g0178 622 Pfam Fatty acid hydroxylase 138 272 IPR006694 GO:0005506|GO:0008610|GO:0016491
Mtr8g0178 622 Pfam WAX2 C-terminal domain 451 614 IPR021940 -
Mtr8g0178 622 PANTHER VERY-LONG-CHAIN ALDEHYDE DECARBONYLASE CER1 1 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0178 Mtr-Chr8 2114773 2121764 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0178 1 615 Lipid Metabolism Gene Families AT1G02190 57.440 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0178 K15404 - gmx:100790115 1053.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0178 8 2114773 2121764 Mtr8g0178 8 2114773 2121764 ECH