Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0176 ATGGGAACTGTTATTGAAGCTGCAAACAAGGATACAAATGGAAGCGTCCTAAATAAAAATCCTACAGTTGTGTTTGTGTTAGGTGGCCCGGGCAGTGGAAAGGGTACTCAATGTGCAAATGTTGTCGAACATTTTGGGTTTACTCACCTCAGTGCTGGTGACCTTCTGCGAGCGGAAATCAAATCTGGCTCCGAAAATGGCACAATGATTCAGAATATGATTAAAGAAGGAAAAATTGTTCCGTCCGAGGTAACAATTAGGCTTCTGCAACAAGCAATTAAAGACAATGGCAATGACAAATTTCTTATTGATGGTTTTCCACGCAATGAGGAAAACCGTGCAGCATTTGAGAGAGTGACTGGAATAGAGCCAGCATTTGTCCTGTATTTTGATTGCCCAGAGGAAGAGATGGAGAGACGACTTCTTAGTAGGAACCAGGGTAGAGAAGACGACAACATTGAAACAATAAGGAAGCGATTCAAGGTTTTCTTGGATTCTAGTCTCCCTGTGATTAATTATTATGATGCAAAGGGAAAAGTTCGCAAGGTTGATGCTGCAAGGCCTGTTGAGGAGGTATTTGAGTCAGTCAAAGCAATTTTCGGTCCAAAAAATGAGAAGGCTGATTGA 627 0.4179 MGTVIEAANKDTNGSVLNKNPTVVFVLGGPGSGKGTQCANVVEHFGFTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIRLLQQAIKDNGNDKFLIDGFPRNEENRAAFERVTGIEPAFVLYFDCPEEEMERRLLSRNQGREDDNIETIRKRFKVFLDSSLPVINYYDAKGKVRKVDAARPVEEVFESVKAIFGPKNEKAD* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0176 208 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 200 IPR027417 -
Mtr8g0176 208 PANTHER NUCLEOTIDE KINASE 1 205 IPR000850 GO:0005524|GO:0006139|GO:0019205
Mtr8g0176 208 PANTHER UMP-CMP KINASE 1 205 - -
Mtr8g0176 208 Pfam Adenylate kinase 26 178 - -
Mtr8g0176 208 TIGRFAM UMP_CMP_kin_fam: UMP-CMP kinase family 23 200 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Mtr8g0176 208 Hamap Adenylate kinase [adk]. 22 201 IPR000850 GO:0005524|GO:0006139|GO:0019205
Mtr8g0176 208 PRINTS Adenylate kinase signature 25 38 IPR000850 GO:0005524|GO:0006139|GO:0019205
Mtr8g0176 208 PRINTS Adenylate kinase signature 53 67 IPR000850 GO:0005524|GO:0006139|GO:0019205
Mtr8g0176 208 PRINTS Adenylate kinase signature 101 117 IPR000850 GO:0005524|GO:0006139|GO:0019205
Mtr8g0176 208 PRINTS Adenylate kinase signature 148 163 IPR000850 GO:0005524|GO:0006139|GO:0019205
Mtr8g0176 208 PRINTS Adenylate kinase signature 165 179 IPR000850 GO:0005524|GO:0006139|GO:0019205
Mtr8g0176 208 Hamap UMP-CMP kinase [CMPK1]. 21 203 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Mtr8g0176 208 Gene3D - 8 200 IPR027417 -
Mtr8g0176 208 CDD ADK 23 192 IPR000850 GO:0005524|GO:0006139|GO:0019205
Mtr8g0176 208 ProSitePatterns Adenylate kinase signature. 101 112 IPR033690 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0176 Mtr-Chr8 2084397 2091059 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0176 K13800 - gmx:100500111 381.719