Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0175 ATGACGACTATGGAAAGCTTAATCGGCTTGGTTAACAGAATCCAACAAGCTTGTACTAAACTCGGTGACTATGGCGGTTCCGATAGCAACAACACTTTCTCTTCTCTTTGGGAAGCTCTTCCTTCTGTCGCCGTCGTAGGTGGTCAGAGTTCAGGGAAATCTTCAGTTTTGGAGAGTATCGTTGGACGTGACTTTCTACCTAGAGGATCAGGGATTGTGACGAGGCGTCCATTGGTGTTACAGCTTCATAAGATAGAAGATGGTGAAAAAGAGTATGCTGAGTTTCTTCACAGACCAGGAAGAAAGATAACCGATTTTGCGATGGTACGCCAGGAAATTCAAGACGAAACTGATAGAATTACGGGAAAGACAAAGCAAATATCTCCTATTCCAATTCATCTTAGCATTTATTCTCCAAATGTTGTCAACCTAACTTTGATTGATTTGCCGGGGTTGACTAAAGTTGCTGTAGAAGGACAGTCTGAGAGTATTGTTGAAGATATTGAAAATATGGTTCGATCTTTTATTGATAAGCCTAATTGTATCATACTGGCTATATCTCCAGCCAACCAGGACATTGCAACTTCTGATGCCATCAAAATTTCCAGGGAAGTGGACCCCTCAGGTGAGAGGACATTTGGCGTGCTGACAAAGCTGGATTTGATGGACAAAGGAACTAATGCATTGGATGTCCTTGAAGGGAGATCTTATCGTCTGCAACATCCTTGGGTCGGTGTAGTAAATCGATCTCAAGCAGATATCAACAAAAATACTGATATGATTGTTGCCAGGCGCAAGGAGGTTGAGTATTTTGAAACCAGTCCTGACTATGGCCACTTAGCCAGCAAAATGGGTTCAGAGTACCTTGCAAAACTGCTCTCACAGCACTTGGAGTCAGTAATTAGGGCACGGATACCTAGTATAACATCTTTGATAAACAAAAGCATCGAAGAACTTGAATCAGAGATGGATCATCTTGGGAGACCAATTGCTGTTGATGCGGGGGCTCAACTATACACCATCCTTGAACTTTGCCGCAAATTTGAACGTGTATTCAAAGAGCATTTAGATGGAGGGCGGCCAGGAGGAGATAGGATATACAATGTGTTTGACAACCAGCTTCCTGCTGCTTTACGGAAGCTTCCGATTGACAAACATCTTTCTCTTCAGAATGTGAAGAGAGTGGTGTCAGAGGCAGATGGTTACCAGCCTCACTTAATTGCCCCAGAGCAAGGTTACCGGAGACTGATTGAAGGGACTCTCAGTTACTTTAGAGGCCCAGCCGAAGCTTCAGTTGATGCAGTTCACTTTGTACTAAAAGAACTTGTGAGAAAATCAATAGGTGAAACTGAGGAATTGAGACGTTTCCCTACCCTTCAAGCCGAATTAGCTGCGGCTACAACTGAGGCTCTGGAGAGGTTCCGTGATGAGAGTAAGAAGACAACTATCCGGCTTGTGGATATGGAGGCTTCGTATCTTACTGTGGATTTCTTTCGTAGACTTCCTCAAGAAATGGAGAAAGCTGGTAATCCAGCTCAACCTACTAATCCATCTAATCGGGGTAATTCAGATCAACCTACTAATCCATCTAACCGTGCCGGCATAAATGACGATCGATACGGTGAGGGGCATTTTAGAAGGATTGGATCGAATGTGTCATCCTATATAGGTATGGTGTCGGAGACACTCAGGGTCACTATTCCAAAGGCCGTGGTTTATTGTCAAGTCAGAGAAGCAAAACAGTCATTGCTAAACTTTTTCTACACGCAAATAGGAAAGAAAGAGGCTAAACAGCTATCTGATATATTAGATGAAGACCCTACCGTGATGGAGAGAAGGCAACAATGTTTCAAAAGGCTTGAACTATATAAAGCAGCAAGGGATGAAATTGATTCGGTTTCTTGGGTAAGATGA 1914 0.4321 MTTMESLIGLVNRIQQACTKLGDYGGSDSNNTFSSLWEALPSVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKIEDGEKEYAEFLHRPGRKITDFAMVRQEIQDETDRITGKTKQISPIPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQSESIVEDIENMVRSFIDKPNCIILAISPANQDIATSDAIKISREVDPSGERTFGVLTKLDLMDKGTNALDVLEGRSYRLQHPWVGVVNRSQADINKNTDMIVARRKEVEYFETSPDYGHLASKMGSEYLAKLLSQHLESVIRARIPSITSLINKSIEELESEMDHLGRPIAVDAGAQLYTILELCRKFERVFKEHLDGGRPGGDRIYNVFDNQLPAALRKLPIDKHLSLQNVKRVVSEADGYQPHLIAPEQGYRRLIEGTLSYFRGPAEASVDAVHFVLKELVRKSIGETEELRRFPTLQAELAAATTEALERFRDESKKTTIRLVDMEASYLTVDFFRRLPQEMEKAGNPAQPTNPSNRGNSDQPTNPSNRAGINDDRYGEGHFRRIGSNVSSYIGMVSETLRVTIPKAVVYCQVREAKQSLLNFFYTQIGKKEAKQLSDILDEDPTVMERRQQCFKRLELYKAARDEIDSVSWVR* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0175 637 MobiDBLite consensus disorder prediction 509 534 - -
Mtr8g0175 637 CDD DLP_1 40 306 IPR001401 GO:0003924|GO:0005525
Mtr8g0175 637 SMART dynamin_3 4 257 IPR001401 GO:0003924|GO:0005525
Mtr8g0175 637 ProSiteProfiles GED domain profile. 545 637 IPR020850 -
Mtr8g0175 637 PANTHER DYNAMIN 1E-LIKE PROTEIN 3 636 - -
Mtr8g0175 637 Gene3D - 4 315 IPR027417 -
Mtr8g0175 637 Pfam Dynamin GTPase effector domain 542 633 IPR003130 GO:0003924|GO:0005525
Mtr8g0175 637 Gene3D Dynamin, middle domain 332 600 - -
Mtr8g0175 637 PANTHER DYNAMIN 3 636 IPR022812 -
Mtr8g0175 637 MobiDBLite consensus disorder prediction 506 540 - -
Mtr8g0175 637 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 66 75 IPR019762 -
Mtr8g0175 637 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 37 306 IPR030381 GO:0005525
Mtr8g0175 637 PRINTS Dynamin signature 40 58 IPR022812 -
Mtr8g0175 637 PRINTS Dynamin signature 65 82 IPR022812 -
Mtr8g0175 637 PRINTS Dynamin signature 138 155 IPR022812 -
Mtr8g0175 637 PRINTS Dynamin signature 188 206 IPR022812 -
Mtr8g0175 637 PRINTS Dynamin signature 207 223 IPR022812 -
Mtr8g0175 637 PRINTS Dynamin signature 230 249 IPR022812 -
Mtr8g0175 637 Coils Coil 636 637 - -
Mtr8g0175 637 Pfam Dynamin family 43 218 IPR045063 -
Mtr8g0175 637 SMART GED_2 540 633 IPR003130 GO:0003924|GO:0005525
Mtr8g0175 637 Pfam Dynamin central region 227 494 IPR000375 -
Mtr8g0175 637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 314 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0175 Mtr-Chr8 2074621 2082311 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0175 - - cpap:110814826 1058.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0175 8 2074621 2082311 Mtr8g0175 8 2074621 2082311 ECH