Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0174 ATGGCGATCTTCTGGAACCGTGCGAGATCATCATCGTCTCCGTTACTTCAACGAATCAAACGCCACGTCATCACCGGCGGTGATTACTTCATACTGTCGCGATCTTTCACTACGTTGGAAGGTCATCGTCCAACTATCGTTCATAAACGGAGTCTTGACATTCTTCATGATCCTTGGTTCAATAAAGGAACAGCATTTTCCATGACAGAACGAGATCGTCTTGATCTACGAGGACTGCTTCCTCCAAATGTTGTGTCTCCTGACGTGCAGATTGAGCGTTTCATGGTTGATCTGAAAAGGCTTGAAGTTCAAGCAAGAGATGGACCTTCTGATCCTAATGCACTGGCCAAGTGGCGAATACTAAACCGACTGCATGACAGAAATGAGACTATGTACTATAAAGTTTTGATTAACAACATTGAGGAATATGCACCAATAGTATATACTCCAACAGTAGGTCTTGTATGTCAGAACTATAGTGGGCTGTTCAGAAGACCAAGAGGAATGTATTTCAGTGCTGAGGATCGTGGAGAAATGATGTCCATGGTCTATAACTGGCCAGCTGAGCAGGTCGATATGATTGTAGTTACAGATGGGAGCAGAATTCTGGGACTTGGGGATCTTGGAGTTCAAGGAATTGGCATTACTATTGGGAAACTTGATCTATATGTTGCTGCTGCTGGCATAAATCCTCAAAGAGTACTTCCTGTGATGATTGACGTTGGGACTAACAACAAAAAGTTACTCGAGGATCCTTTATATTTAGGATTGCAGCAGCATCGCCTTGATGGGGATGACTATCTTGCTGTTATAGATGAGTTTATGGAAGCTGTCTTTACTCGCTGGCCAAATGTGATTGTACAGTTTGAAGATTTTCAAAGCAAATGGGCTTTTAAGTTATTACAACGATATAGAACTACCTACCGAATGTTTAATGATGATGTGCAGGGAACAGCTGGTGTTGCAATTGCTGGACTTCTAGGTGCTGTAAGAGCTCAAGGAAGGCCAATGATTGACTTCCCCAAGCAGAAGATAGTTGTTGCTGGTGCTGGAAGTGCTGGAATCGGTGTTCTTAATGCAGCAAGAAAAACAATGGCAAGGATGCTGGGTAATAATGAAGTAGCTTTTCAGAGTGCAAAGAGTCAATTTTGGGTTGTTGATGCAAAGGGATTAATCACAGAAGGACGTGAAAATATTGATCCAGATGCCCTTCCTTTTGCAAGGAATTTGAAAGAAATGGATCGCCAAGGACTAAGGGAAGGAGCAAGTCTTGCAGAAGTGGTCAAGCAAGTGAAGCCTGATGTCCTCCTAGGACTATCTGCTGTTGGAGGATTGTTCTCGAACGAGGTATTGGAGGCCCTCAAGGATTCAACGTCAACAAGACCAGCCATATTTGCCATGTCAAATCCAACAAAGAATGCTGAATGTACCCCTGACGAAGCATTCTCCATTTTGGGCGACAACATTATATTTGCTAGTGGAAGTCCGTTTAGTAATGTTGATCTAGGAAATGGTAATATTGGACACTGCAACCAGGGAAACAACATGTACCTATTTCCAGGCATTGGTCTTGGAACTCTTTTGTCTGGCTCTAGGATCGTATCCGACGGCATGTTACAGGCTGCTGCTGAGCGTCTGGCTGCATATATGAGTGAAGAAGAGGTTCTCAAAGGGATTATTTTCCCTTCAATATCAAGAATTCGAGATATTACAAAGGAGATAGCTGCAGCTGTTATAGAAGAAGCTGTGGAGGAGGATCTAGCAGAAGGATATCATGAAATGGATGCTCGAGAGCTTCGCAAACTTAGTCGGGATGAAATTAAGGAATACGTGATTAATAACATGTGGAATCCAGAGTACCCAACACTAGTTTACAGGAAAGATTGA 1887 0.4293 MAIFWNRARSSSSPLLQRIKRHVITGGDYFILSRSFTTLEGHRPTIVHKRSLDILHDPWFNKGTAFSMTERDRLDLRGLLPPNVVSPDVQIERFMVDLKRLEVQARDGPSDPNALAKWRILNRLHDRNETMYYKVLINNIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSAEDRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVQGIGITIGKLDLYVAAAGINPQRVLPVMIDVGTNNKKLLEDPLYLGLQQHRLDGDDYLAVIDEFMEAVFTRWPNVIVQFEDFQSKWAFKLLQRYRTTYRMFNDDVQGTAGVAIAGLLGAVRAQGRPMIDFPKQKIVVAGAGSAGIGVLNAARKTMARMLGNNEVAFQSAKSQFWVVDAKGLITEGRENIDPDALPFARNLKEMDRQGLREGASLAEVVKQVKPDVLLGLSAVGGLFSNEVLEALKDSTSTRPAIFAMSNPTKNAECTPDEAFSILGDNIIFASGSPFSNVDLGNGNIGHCNQGNNMYLFPGIGLGTLLSGSRIVSDGMLQAAAERLAAYMSEEEVLKGIIFPSISRIRDITKEIAAAVIEEAVEEDLAEGYHEMDARELRKLSRDEIKEYVINNMWNPEYPTLVYRKD* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0174 628 Pfam Malic enzyme, N-terminal domain 125 305 IPR012301 GO:0004471
Mtr8g0174 628 PRINTS Malic enzyme signature 131 155 IPR001891 GO:0004470|GO:0004471
Mtr8g0174 628 PRINTS Malic enzyme signature 191 220 IPR001891 GO:0004470|GO:0004471
Mtr8g0174 628 PRINTS Malic enzyme signature 227 249 IPR001891 GO:0004470|GO:0004471
Mtr8g0174 628 PRINTS Malic enzyme signature 286 304 IPR001891 GO:0004470|GO:0004471
Mtr8g0174 628 PRINTS Malic enzyme signature 311 327 IPR001891 GO:0004470|GO:0004471
Mtr8g0174 628 PRINTS Malic enzyme signature 345 361 IPR001891 GO:0004470|GO:0004471
Mtr8g0174 628 PRINTS Malic enzyme signature 459 475 IPR001891 GO:0004470|GO:0004471
Mtr8g0174 628 SMART Malic_M_2 315 583 IPR012302 GO:0051287
Mtr8g0174 628 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 315 624 IPR036291 -
Mtr8g0174 628 Pfam Malic enzyme, NAD binding domain 315 582 IPR012302 GO:0051287
Mtr8g0174 628 PANTHER MALIC ENZYME-RELATED 25 624 - -
Mtr8g0174 628 ProSitePatterns Malic enzymes signature. 311 327 IPR015884 GO:0004471
Mtr8g0174 628 CDD NAD_bind_1_malic_enz 315 618 - -
Mtr8g0174 628 Gene3D - 313 627 - -
Mtr8g0174 628 SMART malic_2 125 305 IPR012301 GO:0004471
Mtr8g0174 628 PIRSF ME 11 626 IPR001891 GO:0004470|GO:0004471
Mtr8g0174 628 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 32 314 IPR046346 -
Mtr8g0174 628 PANTHER MALIC ENZYME 25 624 - -
Mtr8g0174 628 Gene3D - 49 312 IPR037062 GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0174 Mtr-Chr8 2053742 2068214 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0174 K00028 - gmx:100799344 1111.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0174 8 2053742 2068214 Mtr8g0174 8 2053742 2068214 ECH