Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0171 ATGAGCCTTCCTTCTTTCCTATTGCTTTCCCTCACAATTTTCTTGTGTTCTTTCAATCCATTTGTTGATGCCAACCACCTCATCCAACAAACATGTAAAAATTGCTCAAAAAGTGATCCCAACATAAGCTACAAATTTTGCATAACATCTCTTCAATCAGATCATAGGACCCAATGTGCCAAAAACCTTGAAGAATTAGGTCTCATATCTATCAAGATAACAAGGCACAATGTGACAAATACTTGTGATTACATCAAAGAGCTTTTAGAGAAGAAAACTAGAGACCCCTTTATCAAAGAATGCTTGGATGATTGTCTTGATGTATATTCCGATGCAATTACAACTTTTAGAGAAGCCATTCGAGATTATAAAGCCAAACGTTATGAAGAATGTAATATTAAGCTAAGCTCAATCATTGATGACTCAACAACTTGTGAAGATGGATTCAAGCAAAAGAATGATGTCATTTCACCATTGACAAAGAGAAACAAAAATATTTTTCAGCTTTCAGCTATAGCACTTTCGATTGTTAACATGCTCAATAAGGATAAATTAAATGGTACATTCTGA 570 0.3404 MSLPSFLLLSLTIFLCSFNPFVDANHLIQQTCKNCSKSDPNISYKFCITSLQSDHRTQCAKNLEELGLISIKITRHNVTNTCDYIKELLEKKTRDPFIKECLDDCLDVYSDAITTFREAIRDYKAKRYEECNIKLSSIIDDSTTCEDGFKQKNDVISPLTKRNKNIFQLSAIALSIVNMLNKDKLNGTF* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0171 189 SMART PMEI_2 23 176 IPR006501 GO:0004857
Mtr8g0171 189 PANTHER PECTINESTERASE INHIBITOR DOMAIN-CONTAINING PROTEIN-RELATED 21 183 - -
Mtr8g0171 189 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 181 IPR035513 -
Mtr8g0171 189 CDD PMEI-Pla_a_1_like 32 179 IPR034088 -
Mtr8g0171 189 Pfam Plant invertase/pectin methylesterase inhibitor 27 176 IPR006501 GO:0004857
Mtr8g0171 189 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 25 180 IPR035513 -
Mtr8g0171 189 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 180 IPR006501 GO:0004857
Mtr8g0171 189 PANTHER PECTINESTERASE INHIBITOR-LIKE 21 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0171 Mtr-Chr8 1976965 1977726 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0171 - - gmx:100306248 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0171 8 1976965 1977726 Mtr8g0171 8 1976965 1977726 ECH