Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0153 ATGGCGTCATCAGATGAAGAGGGGGAGATTGTTCCGGATTCTGTTGATGGTTATTGGTTTGAAAATGATAAGGCTGAATTTGTGTCACTTTCTAGTTTGACATTATTGTGGAGCGTTAATGATGTCACATGTAACTCAGAAGCCAAAGTGTTTTTACGTGGTACCACCGATAATGGTCTCCAGAAAATTCACAAACAGATTATAGGATGGAGATTTGAGCTTTCCTTTGAGCAGCCTGAAATTTCAGTGCTTTTGAGGGAGAAATACTGGATGACTCTTCTAAAACCGAGCAAATGCTTTGAAAATACTATTAGGTCAGTCTTGGTTACAGTTTATTGGTTGCACTGTGTGAAATGGAAACCAGAGGAATCAAGAGCATCTATTCTTGTCAAAGTGTTGAAGGAATTTAGCTCATTTGATATTACACCATCTGAGAACGATGTTCTATGTCATATGGCATTGATTAGTGAAGCTGTTAAAAGGGACACAGATTTAACAAAATCCAAGTATTTGCTTAATTTCATTGGAAAGACATGTTCAAATGGAGACTTCCATGCGGATGTTCACACGACAAAGAAATTAAAAGTGATAGTTGAGTCAGAGGAGAATCCGGAGCAGGAGAATGACATTGTTGAATCAGAGGAGGAGGATCCGGAGGAGGAAAATGACATAGTTGAATCAGAGGAGGATCCGGAGCAGGAGAATGACATTGTTGAATCAGAGGAGGAGGATCTGGAGAAGGAGAATGACATGGTTGAATCAGCGGAGGAGGATCCGGAGGAGGAGAATGACATGGTTGAATCAGCAGAGGAGGATCCAGAGGAGGAGAATGACATGGTTGAATCAGCGGAGGAGGATCCGGAGGAGGAGAATGATAAATCTGACGGTGAAGGCGTACTCAATTTAGATGAAGAGCAAGATATCGGATACGATACTGTTTGTGCAATTTGTGATAACGGTGGTGAAATACTTCCTTGTGAAGGAAGATGTTTGAGATCCTTCCATGCAACCTTAGAGGATGGTAGAGATTCATTGTGTGCATCTCTTGGTTACACTCGTACTGAAGTCAATGCTTTTCCAAACTTCTATTGTGAAAATTGTAAACATAAGAAGCATCAATGCTTTGCATGTGGCAAATTGGGTTCATCTGATGAATCATCTAATCCAGAGGTATTTCCTTGTGTTACTGCAAATTGTGGTCACTATTACCACCCTGAATGTGTTGCAAGACTACTCTACCCTGGCATTGACATTGGACAAGAGGAAATGAGAAAGCGCATTATCATCGAAAAAACATTTGTCTGTCCTCTTCATATATGTTCTTTATGCAGAAAAGGTGAAAATAGAAATGTTCATGATCTGCAATTTGCAATGTGTAGACGCTGCCCTAAAGCTTACCACAGGAAATGCTTGCCTAAGGAAATTTCCTTCACATATGATTATTATACGGGCATTGAGATGAGGGCTTGGGACAATCTCCTTGACAAACGAATTTTGATGTATTGCATGAATCACAAAATAGTTTTGGAACTCGGAACTCCTGCTAGAGACCATCTGATATTTCCGAATAAGGAAGTCAAAAGGAAGATAATCAGTACCGAATCATTACACAGAGAGAAGGATGCTATACCATTGAAGAAATTTTTTGAAGATCTTCTTCCTAATAAGACATTGAAGCCAAAAATGACTATAAAGGAAAGAGTTGGTCTTCAAATGGGTGGTTCTTCCAAAGTTATGGAGAAAATATGTTCTAAGCAAGATACACATATGTCAACTGGACCAGTTTATTTTGACAGGGCTAGAAAATATTTGAAAGTTGAAACCATGTCTGGGTCAAATAGGTCGTTACCAAATTATGAAAACAAAGTGCCTTTAAAAAATGTTAACTTGTCCTGTAATCCAAGGTTGGATGAAGCTAGATACCAACAGAAAAGATCTGTTGGTAGAATTGAAGAAACAAGCTGGAAGAAGCCTCCGGTAAAGAAAGTCAAAACATCACTTGAGGATAGAAAAGCAGATATGGAAAAACGAATTTTGGCTTTAATGGAAGAAGCCACTTCTACATTGAACATGGAAAAATTTAAAAAGGACAATCATGCCGTCAATACAAGTTCGAGTCTCACAGAAACTGTATTTCGTAAGACCCTTACTCTAGGAAAAGTTGAGGGTTCGGTTAAGGCTGTTCAAATAGCTTTACAGAAGCTAGATGAAGGATGTGGTATTGAGGAAGCAAAAGCTATTTGTGAGCCAGAAATCATTCGTCAGCTTTTTACTTGGCAGAAGCAGCTCAAGATATATCTTGCACCTTTTCTTCATGGAAGGCGATATACTTCATTTGGTCGTCATTTCACTAAAATAGATAAGTTGAAGGAGATTGTTGATAGGCTTCATTGGTATGTGCAGAGTGGTGACACGGTTTTGGACTTCTGCTGTGGTGCAAATGACTTCAGCTGTCTAATGAAATCAAAGCTTGAGCAGACTGGGAAGTTATGTTCCTTTAAGAACTATGATTTATTCCAAGCTAAGAATGATTTCAACTTCGAAAAGAGAGATTGGATGAGTGTCCAGGCTGAGGAATTACCCCATGGTTCTAATCTTATCATAGGGCTGAATCCTCCTTTTGGGGTCAGGGGTTCTCTTGCTAACAAATTTATCGACAAGGCACTGACATTTAAGCCAAAACTCCTTATACTTATTGTGCCAAAAGTAACTAGAAGACTTGACAGAAAGAAAGCTGGATATAATTTAATTTGGGCGGATGAGGAAATATGTTCAGGAAAGTCGTTTTATCTGCCTGGTTCTGTCGATACTCGAGATAAGCAATTGGAAGACTGGAACCTGAAGCCGCCGCCTCTTTACCTTTGGAGTCGCCCTGACTGGACTGCTTGGCACATGCAAATTGCTCGAATGCATCGCCACATCAAATATGATGCGTATAATAATAATAAAGGAAAAAAAGTGACAAATTATCTTATGGAGGAGAATCATGATTGTTATCAGAATTACCCTGGGTTACATGCACCTAATAATTTTTTAAGCATATTTGATGGTGTTCCAGATGATAATGGTGACATTATAACAGAGAATGGAGCAACTAGGTTTCCTTGA 3108 0.3919 MASSDEEGEIVPDSVDGYWFENDKAEFVSLSSLTLLWSVNDVTCNSEAKVFLRGTTDNGLQKIHKQIIGWRFELSFEQPEISVLLREKYWMTLLKPSKCFENTIRSVLVTVYWLHCVKWKPEESRASILVKVLKEFSSFDITPSENDVLCHMALISEAVKRDTDLTKSKYLLNFIGKTCSNGDFHADVHTTKKLKVIVESEENPEQENDIVESEEEDPEEENDIVESEEDPEQENDIVESEEEDLEKENDMVESAEEDPEEENDMVESAEEDPEEENDMVESAEEDPEEENDKSDGEGVLNLDEEQDIGYDTVCAICDNGGEILPCEGRCLRSFHATLEDGRDSLCASLGYTRTEVNAFPNFYCENCKHKKHQCFACGKLGSSDESSNPEVFPCVTANCGHYYHPECVARLLYPGIDIGQEEMRKRIIIEKTFVCPLHICSLCRKGENRNVHDLQFAMCRRCPKAYHRKCLPKEISFTYDYYTGIEMRAWDNLLDKRILMYCMNHKIVLELGTPARDHLIFPNKEVKRKIISTESLHREKDAIPLKKFFEDLLPNKTLKPKMTIKERVGLQMGGSSKVMEKICSKQDTHMSTGPVYFDRARKYLKVETMSGSNRSLPNYENKVPLKNVNLSCNPRLDEARYQQKRSVGRIEETSWKKPPVKKVKTSLEDRKADMEKRILALMEEATSTLNMEKFKKDNHAVNTSSSLTETVFRKTLTLGKVEGSVKAVQIALQKLDEGCGIEEAKAICEPEIIRQLFTWQKQLKIYLAPFLHGRRYTSFGRHFTKIDKLKEIVDRLHWYVQSGDTVLDFCCGANDFSCLMKSKLEQTGKLCSFKNYDLFQAKNDFNFEKRDWMSVQAEELPHGSNLIIGLNPPFGVRGSLANKFIDKALTFKPKLLILIVPKVTRRLDRKKAGYNLIWADEEICSGKSFYLPGSVDTRDKQLEDWNLKPPPLYLWSRPDWTAWHMQIARMHRHIKYDAYNNNKGKKVTNYLMEENHDCYQNYPGLHAPNNFLSIFDGVPDDNGDIITENGATRFP* 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0153 1035 MobiDBLite consensus disorder prediction 203 293 - -
Mtr8g0153 1035 CDD PHD2_NSD 373 438 - -
Mtr8g0153 1035 Coils Coil 235 258 - -
Mtr8g0153 1035 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 776 883 IPR029063 -
Mtr8g0153 1035 MobiDBLite consensus disorder prediction 197 298 - -
Mtr8g0153 1035 PANTHER EDM2-LIKE PROTEIN1 1 1015 - -
Mtr8g0153 1035 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 1 1015 - -
Mtr8g0153 1035 SMART PHD_3 313 368 IPR001965 -
Mtr8g0153 1035 SMART PHD_3 373 439 IPR001965 -
Mtr8g0153 1035 SMART PHD_3 440 506 IPR001965 -
Mtr8g0153 1035 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 371 461 IPR013083 -
Mtr8g0153 1035 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 310 370 IPR013083 -
Mtr8g0153 1035 Coils Coil 664 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0153 Mtr-Chr8 1830189 1840167 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0153 - - gmx:100810533 1314.67