Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0111 ATGGAAGCATCAACTGAAACTAACAACAAATTCAGTGAAGAGGAGCAGGTGGTCACTCCATGGGAAGTTGCCGGCAACGGAGGCAAAATCGATTACGACAAACTCATCGACCGTTTCGGTTGTCAAAGAATCGATCAATCTCTCGTTCAACGCGTTGAGAAACTCACTTCTCAGCCCGCTCATGTCTTCCTCCGTCGCAACGTCTTTTTCGCTCACCGTGATTTTGCTGAGATTTTGGATGCATATGAAAAGGGAGAGAATTTTTATTTGTATACGGGACGTGGACCTTCTTCTGAAGCTTTGCATTTGGGTCATTTGATTCCATTCATGTTCACAAAGTATTTGCAAGAGGCTTTTAAGGTTCCTCTGGTTATACAGCTCACTGATGATGAGAAGTTCTTGTGGAAAAATCTTACTATAGAGGAGAGCCGAAGACTTGCGAGGGAGAATGCAAAGGATATCATTGCTTGTGGTTTTGACGTATCAAAGACATTCATCTTTTCTGATTTCGATTATGTTGGCGGTGCCTTCTACAGAAACATGGTACAGATTGGAAAGCGTGTGACGTATAACCAGGTTGTTGGCATTTTTGGGTTCATTGGGGAAGATCATATTGGAAAAGTTAGTTTTCCACCTGTGCAGGCAGCTCCATCATTTCCTAGTTCATTTCCGCATCTATTTGAAGGCAAAGGGAATCTCCGTTGTTTAATTCCTTGTGCAATCGACCAGGATCCTTATTTTAGAATGACACGAGATGTTGCTCCTAAAATCGGATACAACAAGCCTGCTTTGATCGAATCATCATTTTTCCCTGCATTACAGGGAGAAACAGGAAAAATGTCTGCAAGTGATCCCAATTCTGCAATATATGTGACTGATTCTGCAAAAGATATAAAGAATAAGGTAAACAGATATGCATTCTCCGGCGGGCAAGATTCTATAGAAAAACATAGACAATTAGGGGCAAATCTTGAGGTAGATATACCTATCAAATACCTTTCTTTTTTCCTGGAAGATGATGCTGAACTTGAACACATAAAGAAGGAGTATGGAGCAGGACGCATGCTAACTGGTGAGGTGAAGCAACGTCTAATTCAAGTTTTGACAGAAATAGTGGAGAGACATCGGACGGCTCGAGCTAATGTGACTGAAAAGATTTGA 1161 0.4152 MEASTETNNKFSEEEQVVTPWEVAGNGGKIDYDKLIDRFGCQRIDQSLVQRVEKLTSQPAHVFLRRNVFFAHRDFAEILDAYEKGENFYLYTGRGPSSEALHLGHLIPFMFTKYLQEAFKVPLVIQLTDDEKFLWKNLTIEESRRLARENAKDIIACGFDVSKTFIFSDFDYVGGAFYRNMVQIGKRVTYNQVVGIFGFIGEDHIGKVSFPPVQAAPSFPSSFPHLFEGKGNLRCLIPCAIDQDPYFRMTRDVAPKIGYNKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKDIKNKVNRYAFSGGQDSIEKHRQLGANLEVDIPIKYLSFFLEDDAELEHIKKEYGAGRMLTGEVKQRLIQVLTEIVERHRTARANVTEKI* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0111 386 Gene3D HUPs 6 282 IPR014729 -
Mtr8g0111 386 Pfam tRNA synthetases class I (W and Y) 85 371 IPR002305 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Mtr8g0111 386 PANTHER BNAC01G39860D PROTEIN 6 384 - -
Mtr8g0111 386 CDD TrpRS_core 89 371 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Mtr8g0111 386 Gene3D - 283 386 - -
Mtr8g0111 386 PANTHER TRYPTOPHANYL-TRNA SYNTHETASE 6 384 - -
Mtr8g0111 386 SUPERFAMILY Nucleotidylyl transferase 15 384 - -
Mtr8g0111 386 PRINTS Tryptophanyl-tRNA synthetase signature 101 117 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Mtr8g0111 386 PRINTS Tryptophanyl-tRNA synthetase signature 153 172 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Mtr8g0111 386 PRINTS Tryptophanyl-tRNA synthetase signature 235 256 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Mtr8g0111 386 PRINTS Tryptophanyl-tRNA synthetase signature 279 289 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Mtr8g0111 386 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 96 106 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Mtr8g0111 386 TIGRFAM trpS: tryptophan--tRNA ligase 87 385 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0111 K01867 - jre:109003096 676.781