Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0096 ATGGCTATTAATTTCATTTTGTTTGTGTTCGTTTTTGCTAGTCAGCTTATTGCTGGATTCAACAAAGAGCTACCACCTCCAACCTATGGAAATTTAATCACCATTCTCAGTATTGATGGTGGTGGTATTAGAGGGATCATTCCAGCAATAATTCTTGACCAGTTGGAAAAGGCTCTTCAGGCTAAGGATAAAGAAGCATCACTAGCAAATCATTTTGATGTGATAGCTGGGACTAGTACTGGAGGGCTTGTCACTGCTTTGCTCACTACTCCTCACCCAAATGACCCTACTCGTCCTCTATTTACTCCTGCACAAGTAATCGACTTCTACAACAAATACGGTCCTTCAATATTCAATCAAACTAGTGGTTGGGATGCTACATACCCGGGTCCCAAGTATGACGGCAAGTTCTTACATAATATATCACGTGAGTTATTGAAAGATACAAAACTGCATCAGACATTGACCAATGTAGTAATCCCAACATTCGACATCAAGAAATTTCATCCAGTTATTTTCTCAAACTTTAAGCTTGAGGAAGTTCCCAGCCAAGATGCAAAATTATCAGATATATGCATTGGAACTTCAGCTGCACCAACTTATCTACCACCCTATTACTTTGAAAATGATGGTGATGAATTCAATTTGGTTGATGGAGGTGTGGCTGCATGTAATCCGACGTTGGCTGCTGTGAGTGAAGTGATGAAACAACAGAAGGGGAAGGATACCAAAATCTTGTTGTTGTCTATAGGATGTGGATCTAAACAGGTTACAGGGTTTAATGCTGAAGATGCAATTCATTTCTCAGCAGCATTTTGGGCAACATCTGGTCTTGCAACTGGTAGTTATGATAATGCTGCTAAAGACATGACTGAATATTACCTTGCCAAATTGTTCCCAAGCCTCCAATCTTCTGACAACTACCTTAGAATTCAGGAATATAACTTGGATCCATCCATGGATTCCATGGATAATGCTACACAAGCAAACTTGGAAAATCTTGCAAAGGTAGGAGTGAGCCTTCTGAGCCAGCCAGTTTTGAAAATGAACGTAGAAACCAATGTGCCAGAGGAAAAAATCAACCAAGGTACAAATGCTGAGGCTCTTGAAAGGTTGGCAGAGACTTTATACAAAGAGAAGCAGCTTCGTCTGAAAAAGAAATTGATAATGGAAAAATTGGGACGACCACTTCTTGAAACTATCACATTCCCTTTTGCTACTACAAGTTAG 1230 0.3992 MAINFILFVFVFASQLIAGFNKELPPPTYGNLITILSIDGGGIRGIIPAIILDQLEKALQAKDKEASLANHFDVIAGTSTGGLVTALLTTPHPNDPTRPLFTPAQVIDFYNKYGPSIFNQTSGWDATYPGPKYDGKFLHNISRELLKDTKLHQTLTNVVIPTFDIKKFHPVIFSNFKLEEVPSQDAKLSDICIGTSAAPTYLPPYYFENDGDEFNLVDGGVAACNPTLAAVSEVMKQQKGKDTKILLLSIGCGSKQVTGFNAEDAIHFSAAFWATSGLATGSYDNAAKDMTEYYLAKLFPSLQSSDNYLRIQEYNLDPSMDSMDNATQANLENLAKVGVSLLSQPVLKMNVETNVPEEKINQGTNAEALERLAETLYKEKQLRLKKKLIMEKLGRPLLETITFPFATTS* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0096 409 PANTHER PATATIN 1 394 - -
Mtr8g0096 409 SUPERFAMILY FabD/lysophospholipase-like 32 353 IPR016035 -
Mtr8g0096 409 Gene3D Cytosolic phospholipase A2 catalytic domain 26 389 - -
Mtr8g0096 409 Pfam Patatin-like phospholipase 36 230 IPR002641 GO:0006629
Mtr8g0096 409 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 36 231 IPR002641 GO:0006629
Mtr8g0096 409 PANTHER XYLOSE ISOMERASE 1 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0096 Mtr-Chr8 1159699 1163263 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0096 24 383 Miscellaneous Gene Families AT2G26560 46.649 6.75e-103 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0096 - - gmx:100802114 567