Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0095 ATGGGTGCTTTTCTTTTATTTGTGCTTGTTTTTGCTAGTCAAGTGATTGGTGGATTCAATACAAAGCTACCACCTCCTGCCTATGGAAACTCAATAACCATTCTCAGCATTGATGGAGGTGGTATTAAAGGGATTATTCCCAGTGTAGTTCTTCAACGTTTGGAACATATTCTTAAGATTGTGTCAAAAGATGAAAAAGCAGCACTGGCAGATTATTTTGATGTGATAGCAGGGACAAGTACTGGAGGACTCATTGCTGCTATGCTTGCTGCTCCTAACTTGAATGATACTTCTCGTCCTGCATTTACTGCTAAAGAAATCTTACAATTCTACTTGGATTATGGTCAATCTATATTCAACCAAACTGCTGCTAGGAATTGGACTCATACCACCCCGGGTCCGAAGTTTGATGGCGAGTTCTTACGTGCTAAAACACGTGAGATATTGCAAGAAACACGTTTGCATGATACATTGACCAATGTTGTAATCCCAACCTTCGACATCCTTCTACTTCACCCGGTCATTTTCTCAAGCTTTAAGTTGGAGGAAATTCCTAGCCTAGATGCAAAATTGTCGGATATAGCCATTGGGACTTCAGCTGCACCAACTCTTCTACCACCCTATTTCTTTTGGAATCGTAGAAGGCCATTCAATTTAGTTGATGGAGGTATAGCTGCAGGCAGCCCGGCATTGGTTGCAGTAAGTGAAGTGATGCAACAATTGAATGAGAAGAATCCTAATTTCATTCCTGTGAATCCAAACGAACCTACCAAAATCGTGTTGTTGTCATTAGGATGTGGAAGAAACACGATTCTAGGGCCTGGTTCTTTACTTGCAAAAACCTTCTCGTATAATAATTGGACGTCCATTCTTGCTTTGGGTTATGCTAGTGCTGCTGCAGACATACATGAATATCACCTTGCATCAGTCTTCCCAGACTCACCTTCTTCGGAAAATTACTACCTTCGAGTTGAGGAGTATAACTTGAATCCATCTATTGTCAATGTTACCGAAGAAGGCATGCAAAAACTTGTAAAGGCAGGAGAAGACTTGTTGAAACAACCTGTTAAGATACAAAATGTTACTTCGTTTGTCCCATATGTAAAACCAAGTGAGGGTACAAACGATGAGGCTCTTACAAGGTTGGCTGATATTCTATACAAGGAGAAGGAGCTGCGTTTGAAAATGAAATCGATGGAAAAAAGGGGACAGCCATTTACTGCTTCTACTCCACCCCCTTCCCGTATGGTTGCTATGGAATAA 1263 0.4109 MGAFLLFVLVFASQVIGGFNTKLPPPAYGNSITILSIDGGGIKGIIPSVVLQRLEHILKIVSKDEKAALADYFDVIAGTSTGGLIAAMLAAPNLNDTSRPAFTAKEILQFYLDYGQSIFNQTAARNWTHTTPGPKFDGEFLRAKTREILQETRLHDTLTNVVIPTFDILLLHPVIFSSFKLEEIPSLDAKLSDIAIGTSAAPTLLPPYFFWNRRRPFNLVDGGIAAGSPALVAVSEVMQQLNEKNPNFIPVNPNEPTKIVLLSLGCGRNTILGPGSLLAKTFSYNNWTSILALGYASAAADIHEYHLASVFPDSPSSENYYLRVEEYNLNPSIVNVTEEGMQKLVKAGEDLLKQPVKIQNVTSFVPYVKPSEGTNDEALTRLADILYKEKELRLKMKSMEKRGQPFTASTPPPSRMVAME* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0095 420 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 35 234 IPR002641 GO:0006629
Mtr8g0095 420 Pfam Patatin-like phospholipase 35 233 IPR002641 GO:0006629
Mtr8g0095 420 Gene3D Cytosolic phospholipase A2 catalytic domain 26 399 - -
Mtr8g0095 420 MobiDBLite consensus disorder prediction 399 420 - -
Mtr8g0095 420 PANTHER PATATIN 3 404 - -
Mtr8g0095 420 PANTHER XYLOSE ISOMERASE 3 404 - -
Mtr8g0095 420 SUPERFAMILY FabD/lysophospholipase-like 32 360 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0095 Mtr-Chr8 1137679 1142301 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0095 23 393 Miscellaneous Gene Families AT2G26560 43.990 2.08e-92 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0095 - - cam:101513147 535.028