Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0093 ATGGCTGCTTTCCTTTTATTAATGTTCGTTTTTGCTAGTCAGGTGATTGGTGGATTCAATACAAAGCTACCACCTCCTGCATATGGAAGTACAATAACCATACTCAACATTGATGGAGGTGGTATTAAGGGAATTCTTCCTACGGTTGTTCTTGAGCATTTAGAAAAGGCTCTTCAGAATGTGACAAAAGATGAAAACGCAGCATTGGCGGATTATTTTGATGTGATATCAGGGGCTAGCACAGGAGGACTCATTGCTGCTATGCTTGCTGCTCCTCATCCAAACGACCCTTCTCGCCCTGCACTTTATACTCCTGAAATCTTAAAATTCTACTTAGACTTTGGTCCTTCTATATTCAATCAAACTTCCGCTAGATGGTGGTTTAACCTTTCCGAGCGTCCAAAGTATGACGGGAAGTTCTTACATGATAAAGCACGTGAGATATTGCAAGAAACACGATTGCATGATACATTGACCAATGTTGTAATCCCAACCTACGATATCAAGAAAGTCAAACCAATTGTTTTTTCAAGCTTCAAGGTGGAGAAAGTTCCAGACCTAGATGCAAAATTGTCGGATATAGCCATTGGGACTTCAGCTGCACCAACCTTACTACCTCCTTATGGCTTTAAGAATGGTGATATTGAATTCAATTTAGTTGATGGTGCTCTAGTTGCAAGCAGTCCGGCATTGCTTGCAGTGAGTGAAGTGATAAAACTATTAGAGGAAAAGAATTCTGATTTCATTTCTGTGAATGAAAATCAACCTACCAAAATCCTCTTGTTATCATTAGGATGTGGAAGAGATGGAGAGGATAAGGGGGTTAATGCTACATATGCAACATCTTTTAGGGCATTAATAGAATGGCCACAACTGATACTTCCAGCTATTGCTGGTGCTGTTGGAGATATAAATGAATATCATCTTGAATCAATATTTCCAAGTCACCGGTCTTCAGACAATTACTACCTTCGAATTGAGGAGTATAATTTAGATCCATCCATAGGAGGCGATGATACTACCAAAGAAAACCTGGACAAACTTGTAAAGGCAGGAGAGGACTTATTGGAAGAAACTGTTAAGGTCATGGATGTTACTTCTTTTGTCCCATACGAAAAACCAACTGAGGGTACAAATGCTCAGGCTCTTGAAAGGTTGGCTGAAACTCTCTACAAGGAGAAGCAGTTGCGTTTGAAAACGAAATCAATGGAGAAAATAAAATCCATGGAGAAAATGGGACGACCATTTGTTGAAGCAGTTGTCTCTGGAATGAAATAA 1278 0.3975 MAAFLLLMFVFASQVIGGFNTKLPPPAYGSTITILNIDGGGIKGILPTVVLEHLEKALQNVTKDENAALADYFDVISGASTGGLIAAMLAAPHPNDPSRPALYTPEILKFYLDFGPSIFNQTSARWWFNLSERPKYDGKFLHDKAREILQETRLHDTLTNVVIPTYDIKKVKPIVFSSFKVEKVPDLDAKLSDIAIGTSAAPTLLPPYGFKNGDIEFNLVDGALVASSPALLAVSEVIKLLEEKNSDFISVNENQPTKILLLSLGCGRDGEDKGVNATYATSFRALIEWPQLILPAIAGAVGDINEYHLESIFPSHRSSDNYYLRIEEYNLDPSIGGDDTTKENLDKLVKAGEDLLEETVKVMDVTSFVPYEKPTEGTNAQALERLAETLYKEKQLRLKTKSMEKIKSMEKMGRPFVEAVVSGMK* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0093 425 Gene3D Cytosolic phospholipase A2 catalytic domain 26 403 - -
Mtr8g0093 425 Coils Coil 51 71 - -
Mtr8g0093 425 PANTHER PATATIN 1 408 - -
Mtr8g0093 425 Pfam Patatin-like phospholipase 37 233 IPR002641 GO:0006629
Mtr8g0093 425 SUPERFAMILY FabD/lysophospholipase-like 33 360 IPR016035 -
Mtr8g0093 425 PANTHER XYLOSE ISOMERASE 1 408 - -
Mtr8g0093 425 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 35 234 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0093 Mtr-Chr8 1102830 1106296 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0093 23 397 Miscellaneous Gene Families AT2G26560 43.223 3.65e-88 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0093 - - cam:101513147 533.872