Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0092 ATGGGGGCTTTACTTTTATTTCTGTTTGTTTTTGCTAATCAGGTGATTGGTGGATTCAATAAAAAACTACCACCGCCGTCGTATGGAGATACAATAAGCATTCTTAGTATTGATGGAGGTGGTATTAAAGGAATTCTTCCTACGGTTGTTCTTGAGGACTTGGAACAGGCTCTTCAGATTGTGTCAAATGATAAAAACGCAGCATTGGCTGATTATTTTGATGTGATAGCGGGGACCAGCACAGGAGGAATCATTGCTACCATGCTTGCTGCTCCCAACCCAAATGACACTTCTCGTCCTGCATTTACCACTCCAGAAATTTTAGAATTCTACCTAAAATATGGTCCTTCAATATTCAATCAAACTTCTGCTAGTGGTTGGACTGAAGATTCCCCCCGACCGAAGTATGACGGAATATTCTTACGTGATAAAGTAGGTGAGATATTACAAGAAACAAGATTACATGACACATTGACCAATCTTGTAATCACAAGCTTCGACATCCTGAAACTTCACCCAATTGTTTTCTCAACGTTTAAGAAGGACGTTCCTGGCCTAGATGCAAAATTGGCAGATATATGTATTGGTACTTCAGCTGCACCAAGTCAACTACCACCATATCAATTTCTAAATGGTTTTAATATATTCAATTTAGTTGATGGTTTTGTCACTGCAGCTAATCCGGCATTGGTTGCGGTGAGTGAAGTGATACAAGAATTGAATGAGAAGAATTCCAATTTCATTCCTGTGACGGCAAACAAGCCAACCAAAATCGTGTTGTTGTCAATAGGAACCGGAAGAAATGGGGAAACTCAAGGGGTTGATGCTAATATTGCACGATTCATTTCGGCTAATAATTGGATAAAAGTTATGTCTGCAGGTCTTGCTATGTCTGCTCAACACATGAATGAATATCACCTCAAAGCAGTGTTTCCTGATCTCCCATCTTCTGATAATTACCACCTTCGAATTGAGGAGTATAACTTGGACCCGTCCATGGGCGCTGATAATGTTACCATAGAAAGCATGGAAAATCTGATACAGGCAGGAAAGGACTTACTTGAACAAAATGTTAAGGTCATAGATATAAATTCCTTTCTCCCACTCGAAAAACCAAGTGAGGGTACAAATGCTGAGGCTCTTGAAAGGTTGGCTGAAACTCTATACAATGAAAAGCAGCTGCGTTTGAAAAGGAAATCGATGGAAAAAACAGGAGGATCATTTACTGAAGCTATTGCATCCCCTTTTCTAATGTCTGGAATGAAATAG 1269 0.3972 MGALLLFLFVFANQVIGGFNKKLPPPSYGDTISILSIDGGGIKGILPTVVLEDLEQALQIVSNDKNAALADYFDVIAGTSTGGIIATMLAAPNPNDTSRPAFTTPEILEFYLKYGPSIFNQTSASGWTEDSPRPKYDGIFLRDKVGEILQETRLHDTLTNLVITSFDILKLHPIVFSTFKKDVPGLDAKLADICIGTSAAPSQLPPYQFLNGFNIFNLVDGFVTAANPALVAVSEVIQELNEKNSNFIPVTANKPTKIVLLSIGTGRNGETQGVDANIARFISANNWIKVMSAGLAMSAQHMNEYHLKAVFPDLPSSDNYHLRIEEYNLDPSMGADNVTIESMENLIQAGKDLLEQNVKVIDINSFLPLEKPSEGTNAEALERLAETLYNEKQLRLKRKSMEKTGGSFTEAIASPFLMSGMK* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0092 422 Pfam Patatin-like phospholipase 35 232 IPR002641 GO:0006629
Mtr8g0092 422 Gene3D Cytosolic phospholipase A2 catalytic domain 24 401 - -
Mtr8g0092 422 Coils Coil 51 71 - -
Mtr8g0092 422 SUPERFAMILY FabD/lysophospholipase-like 33 367 IPR016035 -
Mtr8g0092 422 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 35 233 IPR002641 GO:0006629
Mtr8g0092 422 PANTHER PATATIN 3 406 - -
Mtr8g0092 422 PANTHER XYLOSE ISOMERASE 3 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0092 Mtr-Chr8 1081479 1091830 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g0092 23 403 Miscellaneous Gene Families AT2G26560 40.100 1.60e-79 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0092 - - cam:101513147 545.428