Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0084 ATGATGGGTGCTATCAGTATCATGGCTTTACCACTCGTCATCTCCGTTTTCAAACCTCTCTCAACCACCACCCCCCTCCACTCTACACTTCTACGCCGCCGCTGTTTCACCACTCTCTCCACCACCACTTCATCTTCACATTCAACTTCAACTTCAACTTCAACTTCTCTCTCTCAACACTCTTCTTCTTCTTCTTCACCTACACACTCCAACAATTCTGCGCCTCACAACCATTCATCTCTCACTTTTCAGCAAGCAATTCAACGCCTTCAGGAATATTGGGCTTCTGTTGGATGTTCTATAATGCAATGCAGCAATACTGAGGTTGGAGCTGGGACTATGAATCCTCTTACATATTTAAGGGTTCTTGGTCCAGAACCATGGAATGTTGCGTATGTAGAACCCAGCATCCGCCCCGATGATAGTCGATATGGAGAAAACCCGAATAGGCTCCAAAGACACACTCAATTTCAGGTGATATTGAAGCCTGATCCTGGAAATTCACAGGACCTTTTTATCCGCAGCCTTTCAGCTTTAGGTATTGATGTTACTGCACATGATATACGATTTGTAGAGGACAACTGGGAGAGTCCGGTTCTTGGTGCGTGGGGTCTGGGGTGGGAAATCTGGATGGACGGAATGGAGATTACTCAATTCACCTACTTTCAGCAGGCTGGAAGTCTCCCGTTATCACCAGTGTCGGTAGAAATCACTTATGGCCTGGAGCGTATCCTCATGTTACTGCAGGGAGTTGATCACTTCAAAAAGATCAAATATTCTGATGGAATTACTTACGGAGAACTGTTCTTGGAGAATGAAAAGGAAATGAGTGCGTATTACTTGGAGCATGCCGGTGTTGATCATCTTCAAAAACATTTTGATTTCTTTGAGGAGGAATCCTGTCGTTTACTTTCTTCAGGCCTTGCGATCCCTGCGTATGATCAGCTTCTGAAAACATCTCATGCTTTTAATATTTTAGACGCCAGAGGCTTTGTTGGAGTAACAGAGCGTGCTCGATATTTTGGTCGCATGCGTAGTTTAGCTCGCCAGTGTGCCCAACTTTGGCTGAAGACCAGAGAGACTCTAGGCTTTCCCCTTGGGTTGATCTCGGAACCTGATCAGTCTGTAATACCAAAGGATGTTTTGGAGGCTGCACGTGAGAAGGTTCATGATAATGAAAGAACATTTGTTCTTGAAATTGGAACTGAAGAGATGCCACCTCAAGATGTTGTTGATGCAAGCAAGCAACTGAAAGATTTAATATTGCAATTACTGGAACGACAGAGGTTAAAGCATGGTGAAGTGCAGGTTTTTTTCACTGCACGGAGACTTGTGGTTTCTGTTGAAAATCTTTTCACAAAACAAACAGAACAGGAGGTTGAGGTTCGAGGTCCTCCTGTTTCAAAAGCATTTGATTCTGATGGAAATCCAACAAAGGCTGCTGAGGGGTTTTCCCGTAAAAACTCTGTTCCACTGAACTTGATATACAGAAAGGTCGATGGGAAAACAGAATATGTATATGCTCGTATAAAAGAGTCTTCAAGACATGCTTTGGAGGTTTTATCTGAAGATTTACCTGCTACTATTGCTAAAATTTCATTTCCAAAGACAATGCGTTGGAACTCACAGGTGATGTTTAGCAGGCCAATCCGTTGGATTTTGGCCTTGCATGGAGATGTTGTGGTCCCATTCATGTTCGCTGGGGTAACGAGTGGAAACTTGTCTTGCGGTCTTCGTAATACGACATCAGCCGTTATCCAGATAGAAAATGCAGAATCTTATTCACTTACAATGAAAAATACGGGAGTCAATGTTGAATTTGAGGACCGTAAGAAAAAAATTGTAGAACAATCTAATATGTTAGCAGAAAGTGTAAATGGCGAAATTCTGATTCCAAAAGGTTTGCTTGACGAGGTTGTAAATCTTGTTGAGGCACCTATTCCAGTGCTTGGAAAGTTTAAAGAAACCTTCTTAGATCTTCCAAAGGATCTTTTGACTATGGTTATGCAAAAACATCAGAAATATTTTGCTGTATGTGATGCTAATGGACAATTGCTGCCTTACTTTATTGCTGTTGCAAATGGAGCAATCGATGAAGCTACAGTGAGGAAAGGAAATGAAGCTGTGCTCAGGGCTCGCTATGAAGATGCTAAGTTCTTTTACGAGTTGGACACTCGTAAAAGGTTTTCAGAATTCCGAGAGCAACTGAAAAACATTCTCTTTCATGAGAAACTTGGGACCATGCTGGATAAAATGACTCGTGTTGAAAACATGGTTACTAAGCTAAGTTGCATCCTGGATATTAATGAAGATATGCAACAAATTATCCGGGAAGCTGCCTCACTTGCCATGTCTGACCTTTCCACATCAGTTGTCACTGAATTTACCGCACTTTCAGGAGTAATGGGGCGTCACTACGCCCTTAGAGATGGATACTCAGAACAGACTGCAGAGGCCTTGTATGAGATCACACTTCCTAGATTTTCTGGAGACATACTTCCTAAAAGTGATGCTGGCATAGTTTTAGCAATTTCTGATAGATTAGATAGCCTGGTCGGTTTATTCAGCGCTGGCTGTCAACCTAGTTCCACAAATGATCCATTTGGTCTGCGAAGAATCTCGTATGGTCTCGTGCAATTGTTGGTGGAAAATAATAAAAACCTAGATTTTAAAGAGGCTCTGGAACTTGCTGCAGATGTCCAGCCAATTAAAGTAAATCCTCAAGTAATAGACGAAGTACTTCAATTTGTTACTCGAAGATTAGAGCAATTTCTGGTGGACAAGGGGGTGAGTGCAGAAATTGTTCGTTCCATCCTTGCAGAGAGGGCTAATTTTCCCGGTCTAGCAGCAAAATCAGCATATAAAATGGAAGAATTATCAAAAGGCGAGCTTTTCCCTAAAGTAGTTGAAGCATACTCTCGGCCAACTAGAATTGTCCGTGGGAAGGAAGACGAGCTTGATGGGGAGTATCAGGTGGATGAGGCTGCCTTTGAGATAAATGAAGAGAGAGTTTTGTGGAACACATTTTTGTCAGTTAAAAAGAGTATCAATCCTGGTCTAGACATCGATGATTTTGTTGAAATTTCATCTCAGCTCATACAACCACTCGAAGATTTCTTTAATAACGTCTTTGTAATGGTGGATGATGCTAAGATCAGAAAAAACAGGCTAGCTCTGCTAAAAGAAATTGCTGATCTCCCTAAAGGAATTGCAGACCTTACATTGTTACCAGGATTTTAA 3240 0.4194 MMGAISIMALPLVISVFKPLSTTTPLHSTLLRRRCFTTLSTTTSSSHSTSTSTSTSLSQHSSSSSSPTHSNNSAPHNHSSLTFQQAIQRLQEYWASVGCSIMQCSNTEVGAGTMNPLTYLRVLGPEPWNVAYVEPSIRPDDSRYGENPNRLQRHTQFQVILKPDPGNSQDLFIRSLSALGIDVTAHDIRFVEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLPLSPVSVEITYGLERILMLLQGVDHFKKIKYSDGITYGELFLENEKEMSAYYLEHAGVDHLQKHFDFFEEESCRLLSSGLAIPAYDQLLKTSHAFNILDARGFVGVTERARYFGRMRSLARQCAQLWLKTRETLGFPLGLISEPDQSVIPKDVLEAAREKVHDNERTFVLEIGTEEMPPQDVVDASKQLKDLILQLLERQRLKHGEVQVFFTARRLVVSVENLFTKQTEQEVEVRGPPVSKAFDSDGNPTKAAEGFSRKNSVPLNLIYRKVDGKTEYVYARIKESSRHALEVLSEDLPATIAKISFPKTMRWNSQVMFSRPIRWILALHGDVVVPFMFAGVTSGNLSCGLRNTTSAVIQIENAESYSLTMKNTGVNVEFEDRKKKIVEQSNMLAESVNGEILIPKGLLDEVVNLVEAPIPVLGKFKETFLDLPKDLLTMVMQKHQKYFAVCDANGQLLPYFIAVANGAIDEATVRKGNEAVLRARYEDAKFFYELDTRKRFSEFREQLKNILFHEKLGTMLDKMTRVENMVTKLSCILDINEDMQQIIREAASLAMSDLSTSVVTEFTALSGVMGRHYALRDGYSEQTAEALYEITLPRFSGDILPKSDAGIVLAISDRLDSLVGLFSAGCQPSSTNDPFGLRRISYGLVQLLVENNKNLDFKEALELAADVQPIKVNPQVIDEVLQFVTRRLEQFLVDKGVSAEIVRSILAERANFPGLAAKSAYKMEELSKGELFPKVVEAYSRPTRIVRGKEDELDGEYQVDEAAFEINEERVLWNTFLSVKKSINPGLDIDDFVEISSQLIQPLEDFFNNVFVMVDDAKIRKNRLALLKEIADLPKGIADLTLLPGF* 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0084 1079 PANTHER GLYCYL-TRNA SYNTHETASE 392 1079 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Mtr8g0084 1079 PRINTS Glycyl-tRNA synthetase alpha subunit signature 135 150 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Mtr8g0084 1079 PRINTS Glycyl-tRNA synthetase alpha subunit signature 156 176 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Mtr8g0084 1079 PRINTS Glycyl-tRNA synthetase alpha subunit signature 187 211 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Mtr8g0084 1079 PRINTS Glycyl-tRNA synthetase alpha subunit signature 213 233 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Mtr8g0084 1079 PRINTS Glycyl-tRNA synthetase alpha subunit signature 236 251 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Mtr8g0084 1079 PRINTS Glycyl-tRNA synthetase alpha subunit signature 321 337 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Mtr8g0084 1079 Pfam Glycyl-tRNA synthetase beta subunit 396 940 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Mtr8g0084 1079 TIGRFAM glyS: glycine--tRNA ligase, beta subunit 393 1076 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Mtr8g0084 1079 MobiDBLite consensus disorder prediction 41 78 - -
Mtr8g0084 1079 SUPERFAMILY HD-domain/PDEase-like 728 873 - -
Mtr8g0084 1079 TIGRFAM glyQ: glycine--tRNA ligase, alpha subunit 82 366 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Mtr8g0084 1079 Gene3D Class II aaRS and biotin synthetases; domain 2 285 364 - -
Mtr8g0084 1079 ProSiteProfiles Heterodimeric glycyl-transfer RNA synthetases family profile. 750 1041 IPR006194 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Mtr8g0084 1079 CDD GlyRS_alpha_core 82 360 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Mtr8g0084 1079 Hamap Glycine--tRNA ligase beta subunit [glyS]. 393 1076 IPR015944 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Mtr8g0084 1079 SUPERFAMILY Class II aaRS and biotin synthetases 82 360 IPR045864 -
Mtr8g0084 1079 ProSiteProfiles Heterodimeric glycyl-transfer RNA synthetases family profile. 82 356 IPR006194 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Mtr8g0084 1079 Pfam Glycyl-tRNA synthetase alpha subunit 83 360 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Mtr8g0084 1079 Hamap Glycine--tRNA ligase alpha subunit [glyQ]. 81 361 IPR002310 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Mtr8g0084 1079 Gene3D Bira Bifunctional Protein; Domain 2 68 284 IPR045864 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0084 K14164 - gmx:100787365 1768.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0084 8 978239 995164 Mtr8g0084 8 978239 995164 ECH