Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0083 ATGGATTACGAAGAAGATGAAGAAGAAGTAGGTGAAGAAGTTGAAGCTATGAAAGCTGTTTATGAAACCGATTGTGTCATTCTTCGTTCCATTCCTCCTCACTTCCATTTATCCCTCAAACCCAGAACCGCTGATGTTTCCTATGATCAGTTTGTAGAAATTGTTCTTGAGGTAAAAGCAACACCAAAGTATCCAAAAGAACCACCTTCTGTTGCTCTTGTGGATTGCAAGGGTTTGGACCAACAGAGACAAAAGCATTTATTGAATCACATAGAAAGTAAAGCCAACGAACTCTCCCCTGGCTTAATGCTTGTAGCTCTCTGTGAGGAAGCGGTGGAGAAACTCTCCGCCATGAATCACCCTGATGGCGATTGCCCGTTGTGTTTATTCCCTTTGGTCACAGAAGGTCACCAAAGTGAAACCTTGCCTTTTATGAAGTTAATGTCTTGCTTTCATTGTTTTCACAGTGAATGTATCATTAGATGGTGGAATTGGATTCAGAGTTCTAAAGAAACAGGCTCTGCCAATGCAGATAATGCAACTGTTCATCGTAACCAGGATAATCTTGAAAAATTGGAAGAGGGTGTTGGAAACTGCCCTGTCTGTCGCAAGCCTTTTCATGCCAAAGATTTGGACCATGTGCTTGACCTAGTTGGTTCACATTCTTCCAGAGTGAGTTTGAATAACGATGAAGTCAATAATGATGAAAAAATCCTTCAATCGGAGAATGAGATCATCAGAAAACAAAGGTTTGAAGCCATCTTAAGTTTACAGAAGGAGAACAATGGTTTGATTGAACCTAAAAAAGATATAGTAATATTGCCTGGTATGTATCTTCAACAACCGGTTGCAGCGCCCACGTCAACCAAGGAACCCGACGAGATGGAACAACAAGAAAGAGATCCACCTGCAGTTGGGTCAGGAAGACATGTCGGCGGGACCTCAAATGGGCCTAGTTCAAGTGGTAACAGGAATATCGGTGCAAGAAGGAATAGACCAAGAAACGGTCATCATTCTAGTTCAACTGCAAGACATCCAAGAAAACCAGTCCAACAACAGTGGGTTAGAAGAGATAATCCTAGCAATAAGCAATAG 1095 0.4183 MDYEEDEEEVGEEVEAMKAVYETDCVILRSIPPHFHLSLKPRTADVSYDQFVEIVLEVKATPKYPKEPPSVALVDCKGLDQQRQKHLLNHIESKANELSPGLMLVALCEEAVEKLSAMNHPDGDCPLCLFPLVTEGHQSETLPFMKLMSCFHCFHSECIIRWWNWIQSSKETGSANADNATVHRNQDNLEKLEEGVGNCPVCRKPFHAKDLDHVLDLVGSHSSRVSLNNDEVNNDEKILQSENEIIRKQRFEAILSLQKENNGLIEPKKDIVILPGMYLQQPVAAPTSTKEPDEMEQQERDPPAVGSGRHVGGTSNGPSSSGNRNIGARRNRPRNGHHSSSTARHPRKPVQQQWVRRDNPSNKQ* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0083 364 MobiDBLite consensus disorder prediction 283 364 - -
Mtr8g0083 364 Gene3D Ubiquitin Conjugating Enzyme 1 120 IPR016135 -
Mtr8g0083 364 MobiDBLite consensus disorder prediction 330 344 - -
Mtr8g0083 364 SUPERFAMILY RING/U-box 117 209 - -
Mtr8g0083 364 SUPERFAMILY UBC-like 6 115 IPR016135 -
Mtr8g0083 364 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 121 217 IPR013083 -
Mtr8g0083 364 PANTHER RING FINGER PROTEIN 25 6 351 IPR039133 GO:0061630
Mtr8g0083 364 SMART ring_2 125 202 IPR001841 -
Mtr8g0083 364 ProSiteProfiles RWD domain profile. 12 118 IPR006575 GO:0005515
Mtr8g0083 364 Pfam RWD domain 8 114 IPR006575 GO:0005515
Mtr8g0083 364 ProSiteProfiles Zinc finger RING-type profile. 125 203 IPR001841 -
Mtr8g0083 364 MobiDBLite consensus disorder prediction 312 328 - -
Mtr8g0083 364 SMART RWD2001b 12 118 IPR006575 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0083 Mtr-Chr8 970203 975636 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0083 K10640 - gmx:100791789 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0083 8 970203 975636 Mtr8g0083 8 970203 975636 ECH