Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0050 ATGGCACCTGCTAATACTTCTGCTGCTGCTTTATCTGAAACTGAATATGAAATGGTGAAAAACATCATTGACATTGAAGTTCTAGAAGAGTTAAGTTTAGCAGATTGTAGCATCTACAAGGTTCCTCACAATCTCCGAAAAGTGAAACAAGAAGCTTACACTCCTCAACTAATCTCAATTGGTCCAATTCACCTTGGAAATGAAGAACTTCAACCAATGCAACAACACAAAAAAAGGTATTTCCATTTCTTCTATGAGCGTCTATCTCAATTCAATCAACAATCCATGATCAAGAACTACAAACTCTATCTCGAAAACAAAGAACAAGAAATAAGAAAATGTTATGCAGAGAAATTTCCCAACATAAGCAAAGAGAAATTTGTGGAAACAATTTTGTTGGATGCTGTTTTCATCATGGAACTTTTGTTGAGAAACAGTTCATGGAAGTCGGATACATCAAAACATGAACATGAATACAAGCAATCCAAGTCATTTAGATGGAAACATAGTGATGATTACATTCTAACACAAGCTTGGCTCAGCAAAAGCATCACAAGGGACTTGATTTTGTTGGAAAATCAGATACCTTTTTTTGTATTGAAGCATCTTTATGACACTGTCGTCCCGAACGACGACAAAAAACCAAATCATGAAGATTTTCTTGATCTTGCACTCGAGTATTTTGCATTCTACGACACTCAGAAATCGTCATCACTTGAAACGAAGTTTGTTTTGGATAAGAATCAGACAAAAAAATATTATTATGTGAGTGGCGTAATTGGTGATGTTGGTAGTGGTAATTCAGTTTCCAAGAAAAAACATTCTGATAAATCTATGAGCAGTAACCATGGGTTTCAAGGTCCCAAACATTTCACTGATCTGATAAGGTTTTTTTACCTTCCAGCTGATTTAGGAAAGAGTGATTGTTCTCATATTTTCCCAAGAACAGTAACAAAGTTAATGGATTCTGGTGTGAGTTTTGAGAAAGTTGTGGGGAGAAGATTACTAGACATAACATTTGAGAAGAAACCATTTCTAAGTAATTTTCTCTGCTTAGGTTGTTTACCTTCATTTTTATGTTTGAATCATTTCAAAGCGCGTCTTAGGATTCCGCAATTGAAGGTTGATCACACAACAGAATGTGTTTTAAGGAACCTCATTGCCCTAGAACAATGTCAATATCAAGAACAACCTTATATATGCAATTATGTTTCACTTGTTGATTCTCTTATACATACACAGGTTGATGTTGATTTGTTGGTCGAGAAGGAAGTGATTGTGCATGAAATGGGAAGTGATAAAGAAGTTGCAATGCTTGTTAATGGTCTTTGTAAACATGTTGTGGTGAATTCAACTTGTTACTATGAGATTATTAATGAGCTTAATAAGCATTATCAGAATATTTGGAACCGTACCATGGCTGCATTATGGTTGGTGTATTTTAGAGATGCTTGGAGAGCTAGTTCTACTTTGGTTGGGATTGCTTTTCTTGTTTACACTGCATTCAACTTTGTACGTCTTGCCAAGATTCTCTTCTAG 1539 0.3528 MAPANTSAAALSETEYEMVKNIIDIEVLEELSLADCSIYKVPHNLRKVKQEAYTPQLISIGPIHLGNEELQPMQQHKKRYFHFFYERLSQFNQQSMIKNYKLYLENKEQEIRKCYAEKFPNISKEKFVETILLDAVFIMELLLRNSSWKSDTSKHEHEYKQSKSFRWKHSDDYILTQAWLSKSITRDLILLENQIPFFVLKHLYDTVVPNDDKKPNHEDFLDLALEYFAFYDTQKSSSLETKFVLDKNQTKKYYYVSGVIGDVGSGNSVSKKKHSDKSMSSNHGFQGPKHFTDLIRFFYLPADLGKSDCSHIFPRTVTKLMDSGVSFEKVVGRRLLDITFEKKPFLSNFLCLGCLPSFLCLNHFKARLRIPQLKVDHTTECVLRNLIALEQCQYQEQPYICNYVSLVDSLIHTQVDVDLLVEKEVIVHEMGSDKEVAMLVNGLCKHVVVNSTCYYEIINELNKHYQNIWNRTMAALWLVYFRDAWRASSTLVGIAFLVYTAFNFVRLAKILF* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0050 512 Pfam Plant protein of unknown function 38 498 IPR004158 -
Mtr8g0050 512 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 3 510 IPR004158 -
Mtr8g0050 512 PANTHER DUF247 DOMAIN PROTEIN 3 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0050 Mtr-Chr8 645787 649829 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0050 - - gmx:100306138 697.967