Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0010 ATGTCAGGAGGAGGGTTGTATAATCCGAACTTCTCTTCCCCTGTGAGAGCTGCTTCTCCTCAGATTAGACCTAATTCAGACATCATCGACAGTCAGTATCTGTCCGAGTTACTGGCAGAGTATCAGAAACTTGGACCATTCATCAAAATCCTTCCCAACTCCAGTCGTCTCTTGAATCAAGAAATATTAAGAGTTTCTGGAATGTTATCCAATCAAGGTTTTGCTGACTTTGACAGACTGCGCCATAGAAGCCCTAGTCCTTTGTCTTCCTCAAACCTCACTGGATGGAATAATCTTCAACACGAGAGATTATGTGGAACTCCTGGAATGACAATGGATTGGCAAGGCGCGCCTGCAAGTCCTAGCTCATACACTGTTAAAAGGATTTTGCGCTTGGAAATTCCAGTGGATACGTACCCTAATTTCAATTTTGTTGGAAGACTTCTGGGACCTAGAGGTAATTCTCTGAAACGGGTAGAAGCTACTACAGGTTGCAGGGTGTTCATTAGAGGAAAGGGGTCAATAAAGGATCCAGACAAGGAAGAGAAATTGAGAGGAAGGCCAGGGTATGAGCATCTCAATGAGCCACTCCACATATTGATTGAAGCCGATTTACCTGCTAATGTTGTTGACATGAGGCTCAGGCAGGCTCAGGAAATTATAGAAGAATTACTGAAACCGGTGGATGAGTCAGAAGATTTCATCAAAAGGCAGCAGTTGCGGGAATTGGCATTGTTGAATTCAAATTTGAGAGAAGAGAGTCCTGGACCAAGCGGTAGTGTATCTCCATTTAATTCTAGTGGAATGAAGCGAGCAAAAACTGGTAGATGA 831 0.4356 MSGGGLYNPNFSSPVRAASPQIRPNSDIIDSQYLSELLAEYQKLGPFIKILPNSSRLLNQEILRVSGMLSNQGFADFDRLRHRSPSPLSSSNLTGWNNLQHERLCGTPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDMRLRQAQEIIEELLKPVDESEDFIKRQQLRELALLNSNLREESPGPSGSVSPFNSSGMKRAKTGR* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0010 276 Gene3D K Homology domain, type 1 26 257 IPR036612 GO:0003723
Mtr8g0010 276 SMART kh_6 126 226 IPR004087 GO:0003676
Mtr8g0010 276 PANTHER STAR PROTEIN, HOMODIMERIZATION REGION-RELATED 4 276 - -
Mtr8g0010 276 ProSiteProfiles Type-1 KH domain profile. 143 200 - -
Mtr8g0010 276 PANTHER RNA-BINDING PROTEIN RELATED 4 276 IPR045071 -
Mtr8g0010 276 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 133 251 IPR036612 GO:0003723
Mtr8g0010 276 MobiDBLite consensus disorder prediction 1 22 - -
Mtr8g0010 276 CDD SF1_like-KH 131 251 - -
Mtr8g0010 276 Pfam KH domain 143 179 IPR004088 GO:0003723
Mtr8g0010 276 MobiDBLite consensus disorder prediction 251 276 - -
Mtr8g0010 276 MobiDBLite consensus disorder prediction 248 276 - -
Mtr8g0010 276 Pfam Homodimerisation region of STAR domain protein 30 76 IPR032377 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0010 Mtr-Chr8 172301 176424 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0010 K14945 - gmx:100797384 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1835 7 34354622 34360725 Mtr8g0010 8 172301 176424 PCT