Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0006 ATGGCTCATGGCCTGAAACCATTGCTGAGGGCTCATGACCTCCTCCAGGCCCATCTGTGCATCAGAGTAGGCAACAACGCCGCTAACCATGTCATAGATATCAGGAAAGACACCTATGAAATATTTGCTGAACCGGTTGATCCAAATGAGGTTGAGAATTATTATACAATTGTCAAGCAGCCTATGGATTTTGGCACTATGAGGGCTAAACTACACGAGGGAATGTATAAGACTCTACAACAATTTGAGGTTGAAGTTTACAAACATTGGTCATGCAATCATGATGTTTTTCTAATATTCAATAATGCGATGAATTTTAATCCTCCCGGTACCATATACTTCAAACAGGCCCGTGTTATAGGTGAGTTGGCTAAGAAAGTTTTTGATGTATTAAGAACCGATCCTGAGAAGTTTGAAATAGAGTTCTCAGAAACAAGGCAGCAAGTGGGTAAAAAAAACCAAAGAGATTTTACGGATTCAACACACGTTAAATCCAATAAAACAATTATTGAAGTCCCCTCACATAATGTGTCATGTTCTTCCCATGTTACGTCTAGCCGAAAAATTGCCAAGACAAGTTTTCATGACACCTCTAAGCATGATCATGCTAGAGATGTAGAGGTTCATACAGGTAACAAAGACATTCACATATGTACATCTGTTGCAGTTGATAGGCATTGTACTTATCGACGTTTTTACCGGGACGAGCCAATAGTTTCAACAATATATGATGATAGATTAAAACTACTTGAGCATGTTAGTCAACAAGATAATGGCTACAAAGATAGCTTGATGTTGTTTGTTAAAGATTTAGGACCTACTGCCCAAAATATAGCTAAAAGAAAATTACTTGGATGTGAAATTCGTACTGCATCCGCTTTTTCTCCTGCAAGCTATATGTCGATGTCTCAAAATCCCTTGAATAAAATGAGAAGCTTCAAGGGAAAGACTAATCTAGAGATTGACGGTGAAGGAAAAAAGATTGAAGGGTCTTCTTGTTCTAATTATCTAGATTCAACTAATTGTGTAGAAAAATTTAATCGCTCTAATTGTGGATCCAAAGAATCTGACAAAAAGTCTAGGACGACATTGGACAAGAATCAAGAACAACTATCACTGTCAACTCAAGATAAATGTCAAACAAATATTTTAGAGTCAAGGTTAGAAAGCAATTACAAACTTCCACCGCGACCCTGGCTCTTGGTAAGTAATGAATATGTTTCACATTCCAATCAAGATAAAATCTATATGCAAAAATCAACTGCAGAGTGTGTAATAGGTGAATGTGAAAATACAGAAGCACAATGTTCAACTGTACCATTGGCTTCCAATTTTGTTTTCAATCTTCCATATTTGAAGACACGTCTTGATCAGATAGACTCCTCAGAACAATACAAACTCTTATAG 1407 0.3696 MAHGLKPLLRAHDLLQAHLCIRVGNNAANHVIDIRKDTYEIFAEPVDPNEVENYYTIVKQPMDFGTMRAKLHEGMYKTLQQFEVEVYKHWSCNHDVFLIFNNAMNFNPPGTIYFKQARVIGELAKKVFDVLRTDPEKFEIEFSETRQQVGKKNQRDFTDSTHVKSNKTIIEVPSHNVSCSSHVTSSRKIAKTSFHDTSKHDHARDVEVHTGNKDIHICTSVAVDRHCTYRRFYRDEPIVSTIYDDRLKLLEHVSQQDNGYKDSLMLFVKDLGPTAQNIAKRKLLGCEIRTASAFSPASYMSMSQNPLNKMRSFKGKTNLEIDGEGKKIEGSSCSNYLDSTNCVEKFNRSNCGSKESDKKSRTTLDKNQEQLSLSTQDKCQTNILESRLESNYKLPPRPWLLVSNEYVSHSNQDKIYMQKSTAECVIGECENTEAQCSTVPLASNFVFNLPYLKTRLDQIDSSEQYKLL* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0006 468 PRINTS Bromodomain signature 37 50 IPR001487 GO:0005515
Mtr8g0006 468 PRINTS Bromodomain signature 51 67 IPR001487 GO:0005515
Mtr8g0006 468 PRINTS Bromodomain signature 67 85 IPR001487 GO:0005515
Mtr8g0006 468 PRINTS Bromodomain signature 95 114 IPR001487 GO:0005515
Mtr8g0006 468 MobiDBLite consensus disorder prediction 350 374 - -
Mtr8g0006 468 SMART bromo_6 13 133 IPR001487 GO:0005515
Mtr8g0006 468 PANTHER BROMODOMAIN CONTAINING PROTEIN 35 464 - -
Mtr8g0006 468 SUPERFAMILY Bromodomain 35 144 IPR036427 GO:0005515
Mtr8g0006 468 PANTHER BROMODOMAIN CONTAINING PROTEIN, EXPRESSED 35 464 - -
Mtr8g0006 468 Pfam Bromodomain 35 118 IPR001487 GO:0005515
Mtr8g0006 468 Gene3D - 20 153 IPR036427 GO:0005515
Mtr8g0006 468 ProSiteProfiles Bromodomain profile. 34 114 IPR001487 GO:0005515
Mtr8g0006 468 MobiDBLite consensus disorder prediction 350 365 - -
Mtr8g0006 468 CDD Bromodomain 29 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0006 Mtr-Chr8 118209 123274 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0006 K22184 - gmx:102667935 381.719