Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g0004 ATGAAAGCAGGAGCTGGTAAAGGGAGAAAAGCATGCCTCATAGTCACAACTGTTTTCATTGCAATTGTATTACTAATAGTCATTCTGGCGTTCACAGTCTTCAAATCCAAGCATCCCGTTACCACTGTGAATTCATTGAAGCTACGAGACTTTGATGTTAACTTGGATATTGCAAAACTAAGGGTAGATTTGAACGTAACCCTGGATGTCGATGTTTCAGTCAAGAATCCAAATAAGGTGGGCTTCAAGTACTCAAACACCACTGCACACCTCAATTACAGAGGCCAGCTCATAGGTGAAGTCCCTATCTCTGCTGGAGACATCTCTTCTGGTGAGACCAAAGGATTCAACCTCACCCTCACCTTTATGGCCGACCGTTTGCTATCCAATTCCCAGCTTTTCTCTGATATCACATCTGGTACATTGCCCCTAAACACTTTCTTGACGATTTTTGGCAAAGTCAATATCTTAGGCTTTATCAAAGTGCATGTGATTTCCTCCGCATCCTGTGATTTTGCGGTTAATACTTCCAACAAAACTGTTGGCAACCAAGAGTGCCAATACAAAACAAAACTTTGA 579 0.4197 MKAGAGKGRKACLIVTTVFIAIVLLIVILAFTVFKSKHPVTTVNSLKLRDFDVNLDIAKLRVDLNVTLDVDVSVKNPNKVGFKYSNTTAHLNYRGQLIGEVPISAGDISSGETKGFNLTLTFMADRLLSNSQLFSDITSGTLPLNTFLTIFGKVNILGFIKVHVISSASCDFAVNTSNKTVGNQECQYKTKL* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g0004 192 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 191 - -
Mtr8g0004 192 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 191 - -
Mtr8g0004 192 Gene3D - 27 174 - -
Mtr8g0004 192 SUPERFAMILY LEA14-like 64 165 - -
Mtr8g0004 192 Pfam Late embryogenesis abundant protein 72 170 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g0004 Mtr-Chr8 99265 100482 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g0004 - - gmx:100811806 299.286