Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3904 ATGGGAAGTGGTGAGAGAAGTTTCAAAGGATTTCTTCTGCATGGGAAGAAGCAAGAGTTCAGAGGTGTACCAAAAGGGTGTCTTGCAATCAAGGTTGGTCAAGGAGAAGATCAACAAAGGTTCGTGGTTCCAGTGATTTACTTCAATCACCCACTCTTCATGCAGCTTCTCAAAGAGGCAGAAGAAGAATATGGTTTTGATCATAAAGGAGCCATAACTATCCCTTGTCGTGTTGAGGAGTTCAGAAACATAAGAGGTTTGATTGATAGGGAAAAGTCTCTTCATCACAATCATCATGTTGGATGCTTTGGTTTCTGA 318 0.4151 MGSGERSFKGFLLHGKKQEFRGVPKGCLAIKVGQGEDQQRFVVPVIYFNHPLFMQLLKEAEEEYGFDHKGAITIPCRVEEFRNIRGLIDREKSLHHNHHVGCFGF* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3904 105 Pfam Auxin responsive protein 21 84 IPR003676 GO:0009733
Mtr7g3904 105 PANTHER SMALL AUXIN-UP RNA-RELATED 15 99 - -
Mtr7g3904 105 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 15 99 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3904 Mtr-Chr7 55798839 55799627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3904 23 89 Calmodulin-binding Proteins AT3G43120 52.239 5.20e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3904 K14488 - pvy:116108881 181.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3904 7 55798839 55799627 Mtr7g3904 7 55798839 55799627 ECH
Mtr8g0760 8 9265884 9266983 Mtr7g3904 7 55798839 55799627 ECH
Mtr7g3904 7 55798839 55799627 Mtr8g0760 8 9265884 9266983 PCT