Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3585 ATGGGGACTGAAAATCCAACTCGTCCAAACTTCCCTTCAAGACCTACTTCCTCGCCTTTTGCTGCTGCTCCTGCTGCTGCACAGACTATGACACCTTTTTCAACGACGGGTCCTGTGGCTGGATCAGAGCCTCCTTCTTTCCGACCTACTACCCCTGCACCTCCTCAAGCCCCCACACCGTTTTCATCGTCTGGACCTGCTGTTAGACCAGGGGCGCCAAGTTTTAGACCTACACCACCGGGCAGGTTTAATGATCCATCAGTGCCTCCTCCTCCCCCATCGTCCAATGTCCCGCCAATGCCAACTGCTGGAGCTTTTCAGCATTTTCCAGCACCTCCCTTTTCGTCGACAGTTCAGCCTCCTCTTACACGGCCTCCACCCTTGGGACAACCATCAATTCACCAACATGCAAGTCAACCACCTCCCTTTCCCCCATCTATTCCACCTCAACCACAGATGCCTTATGTTCAAATGGGGTCTCCACCTATGGGTTCAAATGTTCCTCCTCCTCAATTTCAGTCATCTGTTCCTGGATATGCCCGTATGCAGCCTGGTGCAGAAATTCAAGCTCCACCTATGCATTCCTCTATTCATGCAAATCAAGGAAATTACGGACCTCCACCACCTGCATCATCATCTCCTTTTTTACCTCATCAAGGAGGCTATGCTTCATCACTCCCAGTGGGTAATCCAATAGGTATCCAGCCAACACAGCAACCAGGATATGTTCCCCCTACTGGCACCATTCAGGGCTTGACAGAAGACTTCAGTTCGCTCACAATGCAAACTCGTCCTGGCACATTGGATCCACTATTTGATGCTAAAGAACTTCCAAGGCCGTTGGATGGTGATGTGGAGCCAAAAAAATTGGCTGAGATTTATCCCATGAATTGTGATCCCAGATATCTGCGATTCACTACCAGTGCAATTCCAAGCTCCCAGTCCTTAGCTTCAAGGTGGCATCTGCCTCTTGGAGCAGTTGTATGTCCACTTGCTGAATCTCCGGATGAGGACGAGGTGCCTATAATTAGTTTTGCTCCAGCTAGTGTTGTACGCTGTAGAAGATGCCGCACATACGTGAATCCTTATGTGACTTTTACAGAAGCTGGAAGAAAGTTCCGGTGCAATGTATGCACCTTGCTTAATGATGTTCCTAGTGAATATTATGCACAGTTAGATGCCACCGGAAAAAGAGTTGATTTGAATCAACGACCTGAGCTTACAAAGGGTACTGTAGAATTTGTTGCCCCTGCTGAGTATATGGTGCGGCCACCTATGCCCCCAGTATACTTCTTCCTTATCGACGTTTCCATATCTGCTGTTAGAAGTGGTATGATTGAGGTTGCGGCCCAAACAATCAAGTCCTGTTTAGACGAGCTGCCTGGCTATCCACGAACACAAATAGGGTTTGCCACTTTTGACAGCACTATACATTTTTATAACATGAAGTCAACCTTGGCTCAGCCACAGATGTTGGTAGTCTCAGATCTGGATGACATATTTATTCCACTGCCAGACGATCTTCTTGTTAATTTATCCGAGTCAAGAAGTGTGGTGGAAGCCTTCCTAGATAGTTTGCCAACTATGTTTCAAGATAATGTTAATCTGGAATCAGCTTTCGGTCCTGCTCTTAAGGCTGCTTTCATGGTTATGAGTCAACTTGGAGGGAAATTGTTAATTTTTCAAAATACACTTCCATCTCTTGGTGTTGGTCGCTTGAAATTAAGGGGAGACGATTCACGTGTTTATGGGACAGATAAAGAACATGGACTGAGACTGCCCGAAGATCCATTTTATAAGCAGATGGCTGCTGAGTTTTCTAAGTACCAAATCTCAATAAATGTGTATGCATTCAGTGATAAGTACACTGACATAGCCTCCTTAGGAACTCTGGCAAAGTACACTGCTGGTCAAGTGTATTACTATCCAGCTTTCCAATCAGCCATTCATGGGGAGAAATTGAGTCATGAATTAAGGAGAGACCTCACCAGAGAGACTGCATGGGAAGCTGTAATGCGTATCAGATGTGCAAAAGGTGTTCGTTTCACAACTTATCATGGAAACTTCATGCTAAGGTCCACAGATTTGTTAGCACTTCCAGCTGTAGATTGTGATAAGGCCTTCGCCATGCAGTTATCACTTGAAGAGACATTATTGACAACTCAGACTATTTACTTTCAAGTTGCATTGCTTTATACTGCATCTTGTGGAGAAAGGCGTATCAGAGTACACACAATGGCAGTGCCAGTAGTTACAGACTTGGCAGATATCTATCGCCTGGCTGATACTGGTGCAGTTGTCTCTCTATTTTGTAGGCTAGCAATTGAGAAAACATCGTCCCAAAAACTGGAAGATGCACGGAATGCTGTGCAACTAAGAATTGTGAAAGCCCTCAAGGAGTATCGAAATCTTTATGCTGTGCAACATCGCTTGGCCAACAGGATGATATATCCAGAGTCTTTAAGGCTCCTAAAGTTGTATGGATTAGCTCTTTGTAAATCAACGGCTCTACGTGGAGGGTATGGCGATGTTTCATTGGATGATCGATGTGCAGCAGGACATACAATGATGACTCTACCGATAAAAAAATTGTTGAAACTTCTTTATCCTAGCTTGATTCGACTTGATGAATATCTTCTGAAGCCATCCATACAAGCTGATGACTTAAAAAGTATCGAGAGAAGGTTACCTTTGACTGGGGAGAGCTTAGACTCTAGGGGCCTTTATTTATTTGATGATGGCTTCCGGTTTATTATATGGTTTGGTAGGGTGATTTCACCTGATATAGCAAAGAATTTACTCGGGGCAGACTTCGCGGCAGAATTATCAAAGGCTACTCTCCATGAGCATAATAATGAAATGTCAAGGAGGCTGATGAGGGTACTTGAAAAATTAAGAAATGATGATCGTGCATATTACCAGCTGTGCCACCTTGTGAGGCAAGGTGAGCAGCCTAAAGAAGGATTCCTCCTCCTTACAAACCTTGTTGAGGACCAGATGGGTGGTAACAATGGGTATGTTGATTGGATGCTACAGATATCCCGACAAGTGCAACACTCATAA 3063 0.4486 MGTENPTRPNFPSRPTSSPFAAAPAAAQTMTPFSTTGPVAGSEPPSFRPTTPAPPQAPTPFSSSGPAVRPGAPSFRPTPPGRFNDPSVPPPPPSSNVPPMPTAGAFQHFPAPPFSSTVQPPLTRPPPLGQPSIHQHASQPPPFPPSIPPQPQMPYVQMGSPPMGSNVPPPQFQSSVPGYARMQPGAEIQAPPMHSSIHANQGNYGPPPPASSSPFLPHQGGYASSLPVGNPIGIQPTQQPGYVPPTGTIQGLTEDFSSLTMQTRPGTLDPLFDAKELPRPLDGDVEPKKLAEIYPMNCDPRYLRFTTSAIPSSQSLASRWHLPLGAVVCPLAESPDEDEVPIISFAPASVVRCRRCRTYVNPYVTFTEAGRKFRCNVCTLLNDVPSEYYAQLDATGKRVDLNQRPELTKGTVEFVAPAEYMVRPPMPPVYFFLIDVSISAVRSGMIEVAAQTIKSCLDELPGYPRTQIGFATFDSTIHFYNMKSTLAQPQMLVVSDLDDIFIPLPDDLLVNLSESRSVVEAFLDSLPTMFQDNVNLESAFGPALKAAFMVMSQLGGKLLIFQNTLPSLGVGRLKLRGDDSRVYGTDKEHGLRLPEDPFYKQMAAEFSKYQISINVYAFSDKYTDIASLGTLAKYTAGQVYYYPAFQSAIHGEKLSHELRRDLTRETAWEAVMRIRCAKGVRFTTYHGNFMLRSTDLLALPAVDCDKAFAMQLSLEETLLTTQTIYFQVALLYTASCGERRIRVHTMAVPVVTDLADIYRLADTGAVVSLFCRLAIEKTSSQKLEDARNAVQLRIVKALKEYRNLYAVQHRLANRMIYPESLRLLKLYGLALCKSTALRGGYGDVSLDDRCAAGHTMMTLPIKKLLKLLYPSLIRLDEYLLKPSIQADDLKSIERRLPLTGESLDSRGLYLFDDGFRFIIWFGRVISPDIAKNLLGADFAAELSKATLHEHNNEMSRRLMRVLEKLRNDDRAYYQLCHLVRQGEQPKEGFLLLTNLVEDQMGGNNGYVDWMLQISRQVQHS* 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3585 1020 Pfam Gelsolin repeat 897 948 IPR007123 -
Mtr7g3585 1020 Pfam Sec23/Sec24 beta-sandwich domain 667 751 IPR012990 -
Mtr7g3585 1020 MobiDBLite consensus disorder prediction 190 213 - -
Mtr7g3585 1020 Gene3D - 298 750 - -
Mtr7g3585 1020 Gene3D - 297 409 - -
Mtr7g3585 1020 Pfam Sec23/Sec24 trunk domain 425 661 IPR006896 GO:0006886|GO:0006888|GO:0030127
Mtr7g3585 1020 MobiDBLite consensus disorder prediction 1 41 - -
Mtr7g3585 1020 Pfam Sec23/Sec24 helical domain 762 865 IPR006900 GO:0006886|GO:0006888|GO:0030127
Mtr7g3585 1020 Gene3D Sec23/Sec24 helical domain 751 1017 - -
Mtr7g3585 1020 MobiDBLite consensus disorder prediction 72 99 - -
Mtr7g3585 1020 MobiDBLite consensus disorder prediction 114 128 - -
Mtr7g3585 1020 MobiDBLite consensus disorder prediction 1 160 - -
Mtr7g3585 1020 Gene3D Severin 870 998 IPR029006 -
Mtr7g3585 1020 SUPERFAMILY vWA-like 425 665 IPR036465 -
Mtr7g3585 1020 MobiDBLite consensus disorder prediction 137 156 - -
Mtr7g3585 1020 PANTHER SEC24-RELATED PROTEIN 31 1019 - -
Mtr7g3585 1020 Pfam Sec23/Sec24 zinc finger 351 388 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Mtr7g3585 1020 SUPERFAMILY Helical domain of Sec23/24 762 869 IPR036175 GO:0006886|GO:0006888|GO:0030127
Mtr7g3585 1020 Gene3D von Willebrand factor, type A domain 427 664 IPR036465 -
Mtr7g3585 1020 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 879 1018 IPR036180 -
Mtr7g3585 1020 PANTHER OS04G0129500 PROTEIN 31 1019 - -
Mtr7g3585 1020 CDD Sec24-like 425 666 IPR041742 GO:0006886|GO:0006888|GO:0030127
Mtr7g3585 1020 MobiDBLite consensus disorder prediction 45 61 - -
Mtr7g3585 1020 SUPERFAMILY beta-sandwich domain of Sec23/24 189 760 - -
Mtr7g3585 1020 SUPERFAMILY Zn-finger domain of Sec23/24 338 424 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3585 Mtr-Chr7 52887869 52898656 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3585 K14007 - gmx:100791083 1647.1