Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3575 ATGGTGCAAACACATTTTGTTGTGGTGTTCTGTTTGTTGGCTTTTACATGTTCCCTGCTTCCTTCTTTCTCCTTTGGGATGATGAGAATTGGTTTGCAGAAGAGACCTCTAGATCTTCACAACATGGATGCTTTTAAAATGGTGAGAGAACAACAACTAAGATCAGGAAGACCAATGATGCTTGCACATAAGTCCAGTGATGATGCTATAGTACCTTTGAAGAATTATATGGACGCTCAATATTTCGGTGAGATCGCAATTGGCACTCCCCCACAGACCTTTACTGTCATATTTGATACCGGTAGTTCCAACCTTTGGGTTCCATCATCCAAGTGTTACTTTTCTCTTGCTTGCTATACCCATAATTGGTACAAGGCAAAGAAATCCAAGACATATAACAAAAACGGAACATCTTGTAAAATAAGCTATGGAACCGGATCAATATCTGGTTACTTCAGTCAAGATAATGTTAAAGTTGGCAGTTCCGTTGTCAAGCATCAGGATTTCATTGAGGCTACCCGCGAAGGAAGTCTTTCTTTTCTGGCAGGAAAGTTTGATGGAATATTTGGACTTGGATTTCAAGAGATCTCAGTTGAAAGAGCTTTGCCAGTATGGTACAATATGTTGGAACAAAATCTTATCGGTGAGAAGGTGTTCTCTTTCTGGCTCAATGGGAATCCTAATGCGAAAAAGGGTGGTGAATTAGTTTTTGGTGGTGTTGACCCTAAGCATTTCAAAGGAAAACACACTTATGTTCCGGTTACTGAAAAAGGTTACTGGCAGATTGAAATGGGAGATTTTTTCATTGGAGGCTTGTCAACAGGTGTTTGTGAAGGTGGCTGTGCTGCTATTGTGGACTCAGGAACATCTTTGCTTGCTGGTCCAACTCCTGTTGTGGCTGAAATCAACCATGCTATCGGAGCTGAAGGAGTTCTGAGTGTAGAATGTAAGGAAGTTGTTTCTCAATATGGAGAGTTGATATGGGATCTCCTAGTATCAGGGGTAAAACCTGGTGACGTCTGTTCACAAGTTGGTTTATGTTCTATCCGCGGGGATCAATCTAATAGTGCTGGGATTGAGATGGTTACTGACAAGGAACAGAGTGAGTTGTCAGCAAAAGATACTCCTTTGTGTTCTTCTTGTCAGATGCTTGTTCTTTGGGTCCAGAATCAACTAAAACAAAAGGCAACCAAGGAGAGAGTATTCAACTATGTGAATCAACTGTGTGAGAGTCTTCCAAGTCCATCCGGTGAATCAGTGATAAGCTGTAACGATATTTCTAAGATGCCAAACATTTCATTCACTATTGGAAACAAACCTTTCGTCCTCACACCAGAACAGTATATTCTAAGAACCGGAGAAGGCATTACACAGGTCTGCCTTAGTGGGTTTATTGCTTTTGATGTTCCTCCTCCAAAGGGTCCACTCTGGATTCTTGGTGATGTTTTTATGAGGGCATATCACACTGTTTTCGACTACGGAAACCTCCAAGTTGGTTTTGCTGAAGCTGCCTAG 1515 0.4145 MVQTHFVVVFCLLAFTCSLLPSFSFGMMRIGLQKRPLDLHNMDAFKMVREQQLRSGRPMMLAHKSSDDAIVPLKNYMDAQYFGEIAIGTPPQTFTVIFDTGSSNLWVPSSKCYFSLACYTHNWYKAKKSKTYNKNGTSCKISYGTGSISGYFSQDNVKVGSSVVKHQDFIEATREGSLSFLAGKFDGIFGLGFQEISVERALPVWYNMLEQNLIGEKVFSFWLNGNPNAKKGGELVFGGVDPKHFKGKHTYVPVTEKGYWQIEMGDFFIGGLSTGVCEGGCAAIVDSGTSLLAGPTPVVAEINHAIGAEGVLSVECKEVVSQYGELIWDLLVSGVKPGDVCSQVGLCSIRGDQSNSAGIEMVTDKEQSELSAKDTPLCSSCQMLVLWVQNQLKQKATKERVFNYVNQLCESLPSPSGESVISCNDISKMPNISFTIGNKPFVLTPEQYILRTGEGITQVCLSGFIAFDVPPPKGPLWILGDVFMRAYHTVFDYGNLQVGFAEAA* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3575 504 PANTHER FUNGAL PROTEINASE A, ASPARTIC PROTEINASE SUPERFAMILY PROTEIN 3 504 - -
Mtr7g3575 504 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 96 107 IPR001969 GO:0004190|GO:0006508
Mtr7g3575 504 SUPERFAMILY Saposin 312 413 IPR011001 -
Mtr7g3575 504 Gene3D Acid Proteases 28 239 IPR021109 -
Mtr7g3575 504 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 283 294 IPR001969 GO:0004190|GO:0006508
Mtr7g3575 504 Pfam Saposin-like type B, region 1 376 413 IPR007856 GO:0006629
Mtr7g3575 504 Pfam Eukaryotic aspartyl protease 80 503 IPR033121 -
Mtr7g3575 504 Pfam Saposin-like type B, region 2 315 347 IPR008138 -
Mtr7g3575 504 Gene3D Acid Proteases 240 504 IPR021109 -
Mtr7g3575 504 ProSiteProfiles Saposin B type domain profile. 311 351 IPR008139 -
Mtr7g3575 504 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 3 504 IPR001461 GO:0004190|GO:0006508
Mtr7g3575 504 SUPERFAMILY Acid proteases 17 503 IPR021109 -
Mtr7g3575 504 CDD phytepsin 71 502 IPR033869 GO:0004190
Mtr7g3575 504 ProSiteProfiles Peptidase family A1 domain profile. 81 501 IPR033121 -
Mtr7g3575 504 Gene3D - 311 413 - -
Mtr7g3575 504 PRINTS Pepsin (A1) aspartic protease family signature 87 107 IPR001461 GO:0004190|GO:0006508
Mtr7g3575 504 PRINTS Pepsin (A1) aspartic protease family signature 233 246 IPR001461 GO:0004190|GO:0006508
Mtr7g3575 504 PRINTS Pepsin (A1) aspartic protease family signature 283 294 IPR001461 GO:0004190|GO:0006508
Mtr7g3575 504 PRINTS Pepsin (A1) aspartic protease family signature 477 492 IPR001461 GO:0004190|GO:0006508
Mtr7g3575 504 ProSiteProfiles Saposin B type domain profile. 374 415 IPR008139 -
Mtr7g3575 504 SMART sapb_4 275 347 IPR008139 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3575 Mtr-Chr7 52789225 52793586 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3575 K08245 - gmx:548009 895.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3575 7 52789225 52793586 Mtr7g3575 7 52789225 52793586 ECH
Mtr7g3575 7 52789225 52793586 Mtr1g3048 1 41671684 41676486 PCT