Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3554 ATGGCGAGAGTAGTGAAGGAACCAGAGGAAGTGATGAGAATGCGAGGAGGTTCAGTGCTTGGAAAGAAGACAATTCTGAAGAGTGACCATTTTCCTGGTTGTCAAAATAAACGTCTTTCTCCTCAGATCGAAGGTGCTCCTAATTATCGTCGTGCTGACTCTTTGCATGTTCATGGTGTTGCTATCCCAACTGTTGATGGAATCAGAAATGTTCTTAATCACATTCGTAATCGCCAGAACAAACAACAAGTTCTTTGGATTAGTCTTCGTGAAGAACCGCTTGTGTACATTAATGGCCGTCCGTTTGTTCTGCGTGATGTTGAGAGACCATTCTCCAACCTCGAGTATACGGGAATTAATAGGGAAAGGGTTGAACAAATGGAAGCTCGTTTGAAAGAAGACATCCTGTCGGAAGCTGAAAGATATGGATATAAGATCCTTGTGACGGATGAACTGCCCGATGGTCAGATGGTGGACCAATGGGAACCGGTATCATGTGATTCTGTGAAGACACCATTAGAGGTCTACGAGGAATTGCAAGTGGAGGGATACCTTGTTGATTATGAACGTGTTCCTATAACTGATGAAAAATCACCTAAGGAGCTGGATTTTGATATTTTGGTACATAAAATTTCTCAAGCTGATGTAAATACAGAGATAATTTTTAATTGTCAAATGGGGCGTGGACGAACGACAACCGGAATGGTTATCGCAACTTTGGTCTACCTCAATCGAATTGGAGCCTCTGGGATTCCAAGAAGCAATTCTATGGGTAGAATTTTTCAATCTATGACCAATGCTGCCGACCATTTGCCTAACTCAGAGGAGGCAATTCGTAGGGGAGAATATGCAGTCATAAGAAGCTTGGTTCGGGTGTTAGAGGGTGGTGTTGACGGAAAAAGACAAGTCGACAAAGTCATTGACAAATGTGCTTCAATGCAGAATTTGCGTGAAGCAATTGGTACCTATCGCAATAGCATTCTGCGACAGCCAGATGAGATGAAAAAGGAGGCATCGCTTTCCTTTTTTGTGGAGTACTTGGAGAGATACTACTTTTTAATATGTTTTGCCGTGTACATTAATTCAGAAAGGGATATACTCCTTTCTAGTACCGCTGGTCAAAGTAGTTTTTCCAATTGGATGAGAGCAAGGCCTGAACTTTACAGCATTATTCGCAGGTTACTCAGGAGAGATCCAATGGGTGCACTTGGATATTCAAGTTTGAAACCATCTTTAACAAAGATAGCTGAATCAACTGATGGCCGGCCATCTGAGATGGGTAATGTTGCTGCCTTGAGAAAAGGTGAAGTTCTTGGAAGTCAAACTGTTCTTAAAAGTGATCACTGTCCTGGATGCCAAAATCCGAGTTTGCCGGAGAGAGTGGATGGTGCTCCTAATTTTCGAAAAGTTCCTGGATTTCCAGTTTTTGGTGTTGCAAATCCAACCATTGATGGTATTCGGTCTGTCATTCATAGGATTTGCAGTACTAATGGTGGATGCCCAATACTTTGGCATAATATGAGAGAAGAGCCTGTTATTTACATCAATGGGAAGCCATTTGTTCTTCGTGAAGTTGAACGACCATACAAGAACATGTTGGAGTACACGGGTATTGACTGTGAAAGAGTGGAGAAAATGGAAGCTCGATTAAAAGAAGACATTTTAAGGGAAGCTAAACAATATAGCAGTGCCATAATGGTTATTCATGAAACAGATGATGGTCATATATTTGATGCTTGGGAGCATGTTACCTCTGATTTGATTCAAACACCACTTGAAGTTTTCAAAAGCTTGGAAGCTGAAGGGTTTCCCATTAAGTATGCACGTGTACCCATCACTGATGGAAAAGCTCCCGAGCGTTCTGACTTTGACATTTTGGCAAATAATATTGCTTCTGCTGCAAAGGACACTGCTTTTGTTTTCAATTGTCAGATGGGTAGGGGCAGGACTACTACTGGTACAGTGATAGCCTGCCTTGTAAAACTTCGCGTGGATTTTGGTAGGCCAATTAAAATATTGAGTGATGATATAACCCAAGAAGAATCAAATGGCGGTTCTTCAAGTGGAGATGAAGCTTTAGGCCGTGTCACTGCACTGACCTCCAATATTTCACAAATAAGGATAGACGAGAAACAAAACCGTGTTTTTGGTATAAATGACATTCTCTTGTTATGGAAGATAACCACATTATTTGATAATGGTGCCGAATGCCGAGAGGCCTTAGATGCTGTTATTGATAGATGTTCTGCACTTCAAAACATTCGTCAAGCTGTCCTACAATATAGAAAAGTATTCAATCAACAGCATGTCGAGCCAAGGGTAAGGAGGGTGGCTTTAGATCGTGGTGCTGAGTACTTGGAGCGGTACTTCCGTCTAATTGCTTTTGCAGCGTATCTTGGAAGCGAAGCATTCGATGGGTTTTGTGGACAAGGGAATTCCAGAATGACATTTAAGGTTTGGTTGCATCAGAGGCCAGAGGTACAGGCTATGAAATGGAGCATCAGATCAAGACCAGGGAGGTTTTTCACTGTCCCTGAGGAATTGAGAGAATCACAAGAGTCTCAGCATGGAGATGCAGTGATGGAGTCTACTGTCAATGCCAGAAACGGTTCTGTTTTGGGGAAGGGCTCCATACTTAAAATGTATTTCTTTCCTGGACAGAGAACTTCCAATAATATACAAATACATGGTGCACCTCATGTTTACAAGGTTGATGGATACCCTGTATGTTGCATGGCAACTCCAACCATCTCTGGGGCCAAGGAGATGCTAAACTATCTGGATGCTAAATCTAAACCTGGGTTCACTGCTCGGAAAGTTATATTGACCGATGTAAGAGAAGAAGCAGTTGTTTATATCAACTGTGTTCCCTTTGTCCACAGGGAGTTAAACAAACCTGTTGATACACTCAAACACGTCGGAATCACCGGTCCTGTGGTTGAACACATGGAAGCACGGCTGAAAGAAGACACACTGGCTGAGATTAGACAGTCTGGTGGGCGAATGCTACTACACCGTGAAGAATATGATCCCTCAACAAATCAGTCTACTGTGGTTGGATACTGGGAAAACATTCTGGCAGATGATGTGAAGACACCAGCAGAAGTTTATTCTCTTCTAAAAGATGATGGATATGATATTGTCTATCGGAGGATACCCTTAACAAGAGAGAGAGATGCCTTAGCCTCTGATGTCGATGCAATACAGTATTGTCAAGATGACTCTGCAGGGAGTTACCTCTTTGTATCGCACACAGGTTTTGGTGGAGTCGCATATGCAATGGCCATAATCTGTATTAGACTTGGCGCAGAAGCAAACTTTGCATCCAAAATACTGCAGCCATCATTTGGTCCTGATACATATGCAGTGACTGAAGATAATTCACTTTCTCGAGCTTCTAATGAAACAGCACTTAGGATGGGCGACTATCGGGACATTTTGAACCTTACAAGAGTCCTCGTACATGGTCCCCAAAGCAAAGCAGATGTTGACATTGTCATTGAAAGATGTGCAGGCGCAGGACATATTCGAGATGATATTCTGTATTACATTAGAGAATTTGAGAAGTTTACTGATGATGATGATGAAGAGCGTGCATATCTTTTTGACATGGGTATCAAGGCTTTGAGGCGGTACTTTTTCCTTATCACATTCAGATCGTATCTCTACTGCAACTCTCCCGATGATACAGAATTTGCTGGATGGATGGATGCAAGACCCGAGCTTAGTCATCTATGTAACAATCTAAGAATAGATAAATAG 3762 0.4216 MARVVKEPEEVMRMRGGSVLGKKTILKSDHFPGCQNKRLSPQIEGAPNYRRADSLHVHGVAIPTVDGIRNVLNHIRNRQNKQQVLWISLREEPLVYINGRPFVLRDVERPFSNLEYTGINRERVEQMEARLKEDILSEAERYGYKILVTDELPDGQMVDQWEPVSCDSVKTPLEVYEELQVEGYLVDYERVPITDEKSPKELDFDILVHKISQADVNTEIIFNCQMGRGRTTTGMVIATLVYLNRIGASGIPRSNSMGRIFQSMTNAADHLPNSEEAIRRGEYAVIRSLVRVLEGGVDGKRQVDKVIDKCASMQNLREAIGTYRNSILRQPDEMKKEASLSFFVEYLERYYFLICFAVYINSERDILLSSTAGQSSFSNWMRARPELYSIIRRLLRRDPMGALGYSSLKPSLTKIAESTDGRPSEMGNVAALRKGEVLGSQTVLKSDHCPGCQNPSLPERVDGAPNFRKVPGFPVFGVANPTIDGIRSVIHRICSTNGGCPILWHNMREEPVIYINGKPFVLREVERPYKNMLEYTGIDCERVEKMEARLKEDILREAKQYSSAIMVIHETDDGHIFDAWEHVTSDLIQTPLEVFKSLEAEGFPIKYARVPITDGKAPERSDFDILANNIASAAKDTAFVFNCQMGRGRTTTGTVIACLVKLRVDFGRPIKILSDDITQEESNGGSSSGDEALGRVTALTSNISQIRIDEKQNRVFGINDILLLWKITTLFDNGAECREALDAVIDRCSALQNIRQAVLQYRKVFNQQHVEPRVRRVALDRGAEYLERYFRLIAFAAYLGSEAFDGFCGQGNSRMTFKVWLHQRPEVQAMKWSIRSRPGRFFTVPEELRESQESQHGDAVMESTVNARNGSVLGKGSILKMYFFPGQRTSNNIQIHGAPHVYKVDGYPVCCMATPTISGAKEMLNYLDAKSKPGFTARKVILTDVREEAVVYINCVPFVHRELNKPVDTLKHVGITGPVVEHMEARLKEDTLAEIRQSGGRMLLHREEYDPSTNQSTVVGYWENILADDVKTPAEVYSLLKDDGYDIVYRRIPLTRERDALASDVDAIQYCQDDSAGSYLFVSHTGFGGVAYAMAIICIRLGAEANFASKILQPSFGPDTYAVTEDNSLSRASNETALRMGDYRDILNLTRVLVHGPQSKADVDIVIERCAGAGHIRDDILYYIREFEKFTDDDDEERAYLFDMGIKALRRYFFLITFRSYLYCNSPDDTEFAGWMDARPELSHLCNNLRIDK* 1254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3554 1253 PANTHER METAL ION-BINDING PROTEIN 1 338 - -
Mtr7g3554 1253 PANTHER METAL ION-BINDING PROTEIN 423 603 - -
Mtr7g3554 1253 PANTHER METAL ION-BINDING PROTEIN 344 483 - -
Mtr7g3554 1253 PANTHER METAL ION-BINDING PROTEIN 602 1253 - -
Mtr7g3554 1253 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 432 663 IPR029021 -
Mtr7g3554 1253 CDD PTP_paladin 433 748 - -
Mtr7g3554 1253 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 862 1097 IPR029021 -
Mtr7g3554 1253 SMART PTPlike_phytase_2 943 1101 - -
Mtr7g3554 1253 SMART PTPlike_phytase_2 505 661 - -
Mtr7g3554 1253 SMART PTPlike_phytase_2 87 242 - -
Mtr7g3554 1253 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 9 246 IPR029021 -
Mtr7g3554 1253 CDD PTP_paladin 15 310 - -
Mtr7g3554 1253 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 1 338 - -
Mtr7g3554 1253 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 423 603 - -
Mtr7g3554 1253 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 602 1253 - -
Mtr7g3554 1253 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 344 483 - -
Mtr7g3554 1253 Pfam Inositol hexakisphosphate 944 1099 - -
Mtr7g3554 1253 Pfam Inositol hexakisphosphate 505 661 - -
Mtr7g3554 1253 Pfam Inositol hexakisphosphate 87 241 - -
Mtr7g3554 1253 Gene3D Protein tyrosine phosphatase superfamily 444 688 IPR029021 -
Mtr7g3554 1253 Gene3D Protein tyrosine phosphatase superfamily 24 289 IPR029021 -
Mtr7g3554 1253 Gene3D Protein tyrosine phosphatase superfamily 880 1118 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3554 Mtr-Chr7 52536434 52547210 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3554 - - gmx:100788460 2191.39