Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3553 ATGATGGCAAGTGAGTTACATGGAATTTCCATGTCGTTGTGTTCAAAGAAGCCATCCTTCGACCGTGACAGGGTTCCTTCTTCCTCGTTCTTTGGTAGCAAAGTGAACTTGCTGCATTCAAAGAATGCTGCATCTGATTTTCGTTATGAAAGATTCTCAAGTGTTGTACTGAGAAATAAAACTAATAGATTTGTGACTACTTCTACTCTTGCTGATGTTGCAAATAATTTTATGGCCCTACAATCCCCAATTTTTGCTGGACAAGAAGCAAACCCAAAGACTGTCGCGTCGATCATTTTAGGTGGTGGAGCTGGAACTCGTCTATTCCCTCTTACTCAAAAAAGGGCTAAACCGGCTGTGCCATTCGGAGGATGTTATAGGCTGGTGGACATACCAATGAGCAATTGTATTAATAGTGAAATTAATAAAATTTATGTCCTTACACAATTCAATTCTCAGTCCCTCAACCGTCACATTGCTCGAACATATAATTTGGGAGGTGGCGTCAACTGTGGTGGGAGTTTTATTGAGGTATTGGCAGCAACTCAAACACTCGGCGAATCAGGAAATAAGTGGTTTCAGGGTACTGCCGATGCTGTAAGACGATTCCTTTGGTTGTTTGAGGATGCTGAGCATAGAAACATAGAGAACATTCTGGTATTGTGTGGTGATCAGCTCTATCGAATGGATTACATGGAACTTGTGCAGAAGCACATTAATTCATGTGCTGATATATCTGTATCTTGTCTACCGGTGGATGGCAGCCGTGCTTCTGATTTTGGTTTAGTGAAGGTTGATGAAAGAGGACGGATACACCAGTTCATGGAAAAACCCAAGGGAGATTTATTAAGATCTATGCATGTAGATACGAGTGTTTTTGGATTATCAGCACAAGAAGCAAGGAAATTTCCATACATCGCATCAATGGGTATATATGTGTTTAAATTAGATGTTCTTCGCAAACTTCTCAGGAGTTGTTATCCTAATGCAAATGATTTTGGATCTGAGGTCATTCCAATGGCTGCAAAAGATTTTAAAGTCCAGGCATGTCTTTTCAATGGTTATTGGGAAGATATTGGGACTATAAAATCTTTCTTTGATGCAAACCTGGCTCTTATGGATAAGCCGCCAAAGTTTCAGTTATATGATCAGTCAAAGCCTATTTTTACATGTCCTCGGTTCTTACCCCCAACTAAACTGGAGAAGTGCCAGGTGGTTAATTCATTGGTTTCAGATGGTTGCTTTCTAAGAGAGTGCAAGGTTGAACATTCTATTGTAGGAATTCGCTCAAGACTCAATTCTGGAGTGCAGCTAAAGGATACCATGATGATGGGCGCGGACTATTACGAAACAGAGGCTGAAATCGCATCTCTTTTATCAGCGGGAGACGTTCCTATAGGCATAGGCAAAAATACAAAAATTATGAAATGTATAATTGACAAAAACGCAAGAATTGGAAACAATGTAACAATTGCAAACAAAGAAAATGTGCAGGAGGCTGACAGATCCTCTGAGGGGTTTTATATTCGATCAGGCATTACGGTGGTGTTAAAAAACTCGGTAATAAACAATGGAACAATCATTTAA 1587 0.3995 MMASELHGISMSLCSKKPSFDRDRVPSSSFFGSKVNLLHSKNAASDFRYERFSSVVLRNKTNRFVTTSTLADVANNFMALQSPIFAGQEANPKTVASIILGGGAGTRLFPLTQKRAKPAVPFGGCYRLVDIPMSNCINSEINKIYVLTQFNSQSLNRHIARTYNLGGGVNCGGSFIEVLAATQTLGESGNKWFQGTADAVRRFLWLFEDAEHRNIENILVLCGDQLYRMDYMELVQKHINSCADISVSCLPVDGSRASDFGLVKVDERGRIHQFMEKPKGDLLRSMHVDTSVFGLSAQEARKFPYIASMGIYVFKLDVLRKLLRSCYPNANDFGSEVIPMAAKDFKVQACLFNGYWEDIGTIKSFFDANLALMDKPPKFQLYDQSKPIFTCPRFLPPTKLEKCQVVNSLVSDGCFLRECKVEHSIVGIRSRLNSGVQLKDTMMMGADYYETEAEIASLLSAGDVPIGIGKNTKIMKCIIDKNARIGNNVTIANKENVQEADRSSEGFYIRSGITVVLKNSVINNGTII* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3553 528 TIGRFAM glgC: glucose-1-phosphate adenylyltransferase 96 492 IPR011831 GO:0005978|GO:0008878
Mtr7g3553 528 SUPERFAMILY Nucleotide-diphospho-sugar transferases 95 489 IPR029044 -
Mtr7g3553 528 Pfam Nucleotidyl transferase 97 373 IPR005835 GO:0009058|GO:0016779
Mtr7g3553 528 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 101 120 IPR005836 GO:0005978|GO:0008878
Mtr7g3553 528 Gene3D Hexapeptide repeat proteins 394 528 - -
Mtr7g3553 528 CDD LbH_G1P_AT_C 396 522 - -
Mtr7g3553 528 CDD ADP_Glucose_PP 98 359 - -
Mtr7g3553 528 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 307 317 IPR005836 GO:0005978|GO:0008878
Mtr7g3553 528 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 4, CHLOROPLASTIC/AMYLOPLASTIC 1 528 - -
Mtr7g3553 528 SUPERFAMILY Trimeric LpxA-like enzymes 392 528 IPR011004 -
Mtr7g3553 528 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 192 200 IPR005836 GO:0005978|GO:0008878
Mtr7g3553 528 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 1 528 IPR011831 GO:0005978|GO:0008878
Mtr7g3553 528 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 83 393 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3553 Mtr-Chr7 52530568 52535835 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3553 K00975 - gmx:100786313 916.376