Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3541 ATGACATTTTCCTTTCTCACCCCCTTATTATTTTGCTTTATTGCTCTTTCCTCCTCCTCTGCATCTTTAGGAGTTGAATCATTTATTGGCTACCCTATTATACCAATCTCTTCTCTAATAAGTAAAAACCTTTATGACACAATATTCCTACACAAAGATGACACTGCATGTCCAGCCAAAAACTTTTATCCTTACCAATCCTTCATTGAAGCTTCCAAATATTTTCCTCAATTTGGTACTACAGGTTGTTTGGCCACAAGAAAGCGTGAGATAGCTGCTTTTCTTGCTCAGATTTCACATGAAACTACTGGTGGGTGGGCCACTGCACCTGATGGACCATTTTCTTGGGGCTTATGCTTCAAAGAAGAAATTAGTCCTCAAAGTAACTACTGTGATTCTACTGACAAAGATTGGCCTTGCTTTGAAGGCAAAACTTACAAAGGAAGAGGTCCTATTCAACTATCTTGGAATTATAACTATGGACCAGCAGGGAAGGCCTTAGGATTTGATGGGCTGAGGAATCCAGAGATTGTATCAAACAATTCAGTGATTGCTTTCAAAACTGCTCTATGGTTTTGGATGACAGAGAGAAAACCAATACCTTCTTGTCACAATGTGATGGTTGGAAAATATTTGGCAACAAAAGCTGACATAGCTGCTAATCGCACAGCTGGTTTTGGATTGGTGACAAATATAGTCAATGGTGGATTGGAATGTGGAATTCCTAATGATGCAAGAGTGAATGATCGAATTGGATTTTTTCAAAGATATACTAAGTTGTTCAATGTGGATACTGGACCTAATTTGGATTGTGGATATCAGAAATCTTTTCAATAA 837 0.3811 MTFSFLTPLLFCFIALSSSSASLGVESFIGYPIIPISSLISKNLYDTIFLHKDDTACPAKNFYPYQSFIEASKYFPQFGTTGCLATRKREIAAFLAQISHETTGGWATAPDGPFSWGLCFKEEISPQSNYCDSTDKDWPCFEGKTYKGRGPIQLSWNYNYGPAGKALGFDGLRNPEIVSNNSVIAFKTALWFWMTERKPIPSCHNVMVGKYLATKADIAANRTAGFGLVTNIVNGGLECGIPNDARVNDRIGFFQRYTKLFNVDTGPNLDCGYQKSFQ* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3541 278 Gene3D Endochitinase, domain 2 122 180 - -
Mtr7g3541 278 PIRSF Endochitinase 14 278 IPR016283 GO:0004568|GO:0005975
Mtr7g3541 278 Gene3D - 43 277 - -
Mtr7g3541 278 Pfam Chitinase class I 39 271 IPR000726 GO:0004568|GO:0006032|GO:0016998
Mtr7g3541 278 ProSitePatterns Chitinases family 19 signature 2. 184 194 IPR000726 GO:0004568|GO:0006032|GO:0016998
Mtr7g3541 278 CDD chitinase_GH19 40 271 - -
Mtr7g3541 278 SUPERFAMILY Lysozyme-like 36 277 IPR023346 -
Mtr7g3541 278 PANTHER CHITINASE-RELATED 5 277 - -
Mtr7g3541 278 PANTHER OS05G0138200 PROTEIN 5 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3541 Mtr-Chr7 52419967 52421679 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3541 15 277 Glycoside Hydrolase AT4G01700 69.962 4.51e-147 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3541 - - gmx:100784196 473.396