Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr7g3537 | ATGTCTAATAACCCAACACAACCTAATGTTGGGTTCATCCCATCAAACCCAGAACAAAAACAGACTCCAATTCCAATTCTTCCCCCTCCTCCGCCTCCTTCAACTAGTATTTTAGCACCACCACCTAGATTTCCTCCACCAATATTACAACTACAGAAAGATCATACTTCATCTGCCAATGGCAGTCCAGTTCCTCACTTGAGTACCCCTCCTGGACCTCCTGTATTTACATCTCCTGTCCGTCCAGCTGCCATTCCTTTTCGAACTTCACCCGCTTCGCCTCAGCCGCCTGCTCGTTCCTCAGCCTCTTCTTTGCCAACCTCGTCGCCACCACGTTACTCAAATGGATCTTTTGACTTACAGTCACAAGTGTCTGGTGGCTTAGAGGATCATATTCCAAATGGAGAGTCATCCTTTGTACTTTTCTCAGCTCATAAGGTATTGAAGCAGAAGAAACAAGCAAATGTACCCAGTTTGGGTTTTGGGGCTTTGGTCTCTCCTGGTAGGGAGGTCTCAACTGGCCCCCAGGTAATACAGCGTGATCCCCATCGCTGTCAAAGCTGTGGGGCATATGCAAATATATACTGCAACATATTGCTTGGATCAGGCCAGTGGCAGTGTGTTATATGTCGAAAACTGAATGCAAGTGACGGTGAGTACATTGCACATAGCAAAGAAGATCTTCACAGATTTCCAGAACTGTCTTCACCAATGGTTGACTATGTTCAAACTGGGACCAAGCGACCTGGTTTTGTTCCAGTTTCAGATTCCAGAATGTCTGCACCAGTAGTTCTTGTAATAGATGAATGTCTAGATGAACCTCACTTACAGCATCTTCAGAGCTCTTTGCATGCATTTGTTGATTCTCTGCCTCCAACAACAAGATTAGGAATTATATTATATGGCCGTACTGTGTCGGTGTACGACTTTTTAGAAGAATCAGTTGCATCTGCTGATGTGCTTCCTGGGGACAAGTCGCCAAGTGAAGATTCTTTGAAGGCTTTGCTTTATGGTACCGGTATATATTTGTCGCCAATGCATGCTTCACTGGCTGTAGCGCATTCAATATTTTCATCATTGACGCCGTATAAGTTGAACGTACCAGAAGCTTCCAGAGATCGGTGCCTAGGAACTGCTGTTGAAGTTGCTCTTGCTATAATTCAGGGCCCATCTGCTGATCTGTCTCGAGGGGTTGTCAAAAGGTCAGGGGGCAATAGTAGAATTATTGTCTGTGCCGGTGGACCGAACACTTACGGGCCTGGATCTGTTCCTCATTCTTTTAACCACCCTAATTATCCGTATATGGAAAAGACAGCATTGAAATGGATGGAGAATTTAGGTCGTGAGGCTCATCGACACAATATATTGGTTGATATATTATGTGCTGGAACATGCCCTGTAAGAGTTCCTATCTTAAATCCTCTTGCAAAAGCATCAGGTGGAGTTTTGGTTCTTCATGATGATTTTGGAGAAGCCTTTGGCGTTAATTTACAAAGGGCGTCTGCCAGATCGGCAGGCTCCCATGGACTGTTAGAATTGCGCACATCAGATGATATTCTCATCACTCAAGTTGTGGGTCCGGGGGAAGAGTCACATGTAGACACCCATGAAACATTTAAAAACGACGCCGCTCTTTATATTCAAATGCTAAGTGTTGAAGAGACACAGAGCTTCGCTCTCTCTATGGAAACCAAAGGAGACATCAAAAGCGATTTTGTCTTTTTCCAGTTTGCAATTCAGTATTCAAATGTGTATCAGGCTGATGTCTCAAGGGTCGTTACTGTTAGATTGCCAACAGTAGATAGTGTTTCGGGATATCTTGAAAGTGTTCAGGATGAAGTGGCTGCTGTCCTCATTGCAAAGAGAACTTTGTTACGAGCTAAGAACCATTCAGTTGCTGTTGATATGCGGGCAACAATAGATGAAAGAATCAAGGATATTGGCCTAAAATTTGGCTCCCAATTACCCAAATCAAAACTTCATTGCTTCCCAAAGGAGCTTTCTCTCTTACCGGAGCTCCTTTTCCATCTCAGGAGAGGGCCACTATTGGGATGCATTATTGGCCATGAAGATGAGAGGTCCGTGCTGAGGAACCTATTTCTAAATGCATCTTTTGATCTATCTCTCAGAATGGTGGCTCCTCGTTGTCTAATGCACAGGGAGGGGGGAACTTTTGAAGAGCTACCGGCTTATGATCTTGCCATGCAGTCCGATACTGCTGTTGTACTTGATCATGGAACTGATGTCTTCATTTGGCTGGGTGCTGAACTTGTAGCCAATGAAGGAAAAAGTGCTTCTGCTTTGGCTGCATGCAGGACATTGGCTGAAGAGCTGACCGAGTTCCGTTTTCCAGCTCCTCGTATCCTTGCATTCAAGGAGGGTAGCTCGCAGGCTCGATATTTTGTCTCTCGTCTCATACCAGCACACAAGGATCCTCCTTATGAGCAGGAGGCAAGGTTCCCTCAACTTAGGACATTAACATCGGAACAGAGAACAAAGCTGAAAAGCAGTTTTGTTCACTTCGACGATCCAAGTTTCTGTGAATGGATGCGAAGTTTGAAGGTCGTACCACCTCAACCAAGTTGA | 2586 | 0.449 | MSNNPTQPNVGFIPSNPEQKQTPIPILPPPPPPSTSILAPPPRFPPPILQLQKDHTSSANGSPVPHLSTPPGPPVFTSPVRPAAIPFRTSPASPQPPARSSASSLPTSSPPRYSNGSFDLQSQVSGGLEDHIPNGESSFVLFSAHKVLKQKKQANVPSLGFGALVSPGREVSTGPQVIQRDPHRCQSCGAYANIYCNILLGSGQWQCVICRKLNASDGEYIAHSKEDLHRFPELSSPMVDYVQTGTKRPGFVPVSDSRMSAPVVLVIDECLDEPHLQHLQSSLHAFVDSLPPTTRLGIILYGRTVSVYDFLEESVASADVLPGDKSPSEDSLKALLYGTGIYLSPMHASLAVAHSIFSSLTPYKLNVPEASRDRCLGTAVEVALAIIQGPSADLSRGVVKRSGGNSRIIVCAGGPNTYGPGSVPHSFNHPNYPYMEKTALKWMENLGREAHRHNILVDILCAGTCPVRVPILNPLAKASGGVLVLHDDFGEAFGVNLQRASARSAGSHGLLELRTSDDILITQVVGPGEESHVDTHETFKNDAALYIQMLSVEETQSFALSMETKGDIKSDFVFFQFAIQYSNVYQADVSRVVTVRLPTVDSVSGYLESVQDEVAAVLIAKRTLLRAKNHSVAVDMRATIDERIKDIGLKFGSQLPKSKLHCFPKELSLLPELLFHLRRGPLLGCIIGHEDERSVLRNLFLNASFDLSLRMVAPRCLMHREGGTFEELPAYDLAMQSDTAVVLDHGTDVFIWLGAELVANEGKSASALAACRTLAEELTEFRFPAPRILAFKEGSSQARYFVSRLIPAHKDPPYEQEARFPQLRTLTSEQRTKLKSSFVHFDDPSFCEWMRSLKVVPPQPS* | 862 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr7g3537 | 861 | Pfam | Sec23/Sec24 beta-sandwich domain | 508 | 599 | IPR012990 | - | |
| Mtr7g3537 | 861 | Pfam | Sec23/Sec24 trunk domain | 264 | 490 | IPR006896 | GO:0006886|GO:0006888|GO:0030127 | |
| Mtr7g3537 | 861 | SUPERFAMILY | Zn-finger domain of Sec23/24 | 172 | 244 | IPR036174 | GO:0006886|GO:0006888|GO:0008270|GO:0030127 | |
| Mtr7g3537 | 861 | SUPERFAMILY | Helical domain of Sec23/24 | 612 | 712 | IPR036175 | GO:0006886|GO:0006888|GO:0030127 | |
| Mtr7g3537 | 861 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Mtr7g3537 | 861 | SUPERFAMILY | vWA-like | 263 | 495 | IPR036465 | - | |
| Mtr7g3537 | 861 | SUPERFAMILY | beta-sandwich domain of Sec23/24 | 14 | 610 | - | - | |
| Mtr7g3537 | 861 | PANTHER | PROTEIN TRANSPORT PROTEIN SEC23 | 50 | 861 | - | - | |
| Mtr7g3537 | 861 | MobiDBLite | consensus disorder prediction | 1 | 129 | - | - | |
| Mtr7g3537 | 861 | CDD | gelsolin_like | 714 | 805 | - | - | |
| Mtr7g3537 | 861 | Gene3D | Sec23/Sec24 helical domain | 601 | 720 | - | - | |
| Mtr7g3537 | 861 | Pfam | Sec23/Sec24 zinc finger | 182 | 220 | IPR006895 | GO:0006886|GO:0006888|GO:0008270|GO:0030127 | |
| Mtr7g3537 | 861 | MobiDBLite | consensus disorder prediction | 21 | 48 | - | - | |
| Mtr7g3537 | 861 | SUPERFAMILY | C-terminal, gelsolin-like domain of Sec23/24 | 714 | 854 | IPR036180 | - | |
| Mtr7g3537 | 861 | CDD | trunk_domain | 256 | 499 | - | - | |
| Mtr7g3537 | 861 | Gene3D | von Willebrand factor, type A domain | 262 | 507 | IPR036465 | - | |
| Mtr7g3537 | 861 | PANTHER | PROTEIN TRANSPORT PROTEIN SEC23 | 50 | 861 | IPR037364 | - | |
| Mtr7g3537 | 861 | MobiDBLite | consensus disorder prediction | 51 | 65 | - | - | |
| Mtr7g3537 | 861 | Gene3D | Severin | 728 | 825 | IPR029006 | - | |
| Mtr7g3537 | 861 | MobiDBLite | consensus disorder prediction | 94 | 128 | - | - | |
| Mtr7g3537 | 861 | Pfam | Sec23/Sec24 helical domain | 613 | 709 | IPR006900 | GO:0006886|GO:0006888|GO:0030127 | |
| Mtr7g3537 | 861 | MobiDBLite | consensus disorder prediction | 66 | 80 | - | - | |
| Mtr7g3537 | 861 | Gene3D | - | 172 | 235 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr7g3537 | - | - | gmx:100781518 | 1499.57 |