Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3533 ATGAGAATTAATGGTAGATTTATGAACTTCCGTTATCTTTTTCAGTTGCGGAAGCGATTCGAATCAAAATCCGAACTCTCACTTCCGAATTTCCGGTTTCGTCTTTACTCTTCCGAAGTGGAACCTGAAATTTCACCGGATCTGTTAAAAATAATGGAACAAAGATTCTCTGCTATTAAGCACAGAGCTACTTGTCTTGATAATCTTATTAATCAGCCAGAAACGTCTCAGTCGGAGTATGCAAGAGCTAACAAGGAGCTTCGAAAGCTCAGTGGTTCCGTGCAACTTATTAATCAATTGAAGGCCAAACAGAAGGAAATTGATGGCTTGAAGTCACTAATGAATGAAAGTTCTGAAGACAAAGACATGCTAAATATGGCAACAGAGGAAATGGGCCAGGCCATAGAGGAAGAAAGGAAACTGCAGAATTTGCTGCTGAAGTCGTTACTTCCTAAGGATGATGCTGATGAAAGAGATTGCATTTTGGAGGTACGAGCAGGCACTGGTGGGGAGGAGGCTTCCTTGTTTGCAATGAATATCTTTAAGATGTACGAGAAGTATGCTCACAACAAAGGCTGGAAGTTTGATGTGGTAGATATAGCTCAATCTGATATGAAGGGATTCAAGGAGGCTACTGCAGCTATTTTAGGAGTTGGTGTTTTTGGGAAACTAAAATTTGAGAGTGGAATTCATAGAGTACAGCGAGTTCCTGTGACCGAAAAATTGGGACGTGTTCATACCAGTGCTGTTTCCGTTGCAATTCTCCCACAGGCTGATGAGGTTGACGTTCAGTTAAAAAAGGAAGACTTGAAAATTGATTTCTATAGATCCGGTGGTTCAGGTGGTCAGCATGCAAATAAAACTAGCAGTGCTGTTAGAATGACTCACATTCCAACTGGGATCGTGATTGCTATACAAGATGAGCGTTCTCAGCATATGAATAAAGCCAAAGCTCTCAAAGTACTGTGTGCAAAGCTATATGAAATAGAAAGAACCAGACTTCATAGTAGTCGATCAAAGCTTCGATCAGACCAGATTGGTAGTGGGGACAGATCTGAACGCATCCGAACATACAACTTTCCTCAAGGCCGTGTAACTGATCATAGAGTTGGTATCACTTATCACAACATAGACGATGTGATGCAAGGAGAGAGTCTTGATGCCTTCATTGATGCTCTTCTTCTTAAAGAAGAAATGGATGCAATTGCAACTTTTCGTTCTTCTACGTAA 1230 0.4098 MRINGRFMNFRYLFQLRKRFESKSELSLPNFRFRLYSSEVEPEISPDLLKIMEQRFSAIKHRATCLDNLINQPETSQSEYARANKELRKLSGSVQLINQLKAKQKEIDGLKSLMNESSEDKDMLNMATEEMGQAIEEERKLQNLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAMNIFKMYEKYAHNKGWKFDVVDIAQSDMKGFKEATAAILGVGVFGKLKFESGIHRVQRVPVTEKLGRVHTSAVSVAILPQADEVDVQLKKEDLKIDFYRSGGSGGQHANKTSSAVRMTHIPTGIVIAIQDERSQHMNKAKALKVLCAKLYEIERTRLHSSRSKLRSDQIGSGDRSERIRTYNFPQGRVTDHRVGITYHNIDDVMQGESLDAFIDALLLKEEMDAIATFRSST* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3533 409 Pfam PCRF domain 60 252 IPR005139 GO:0006415
Mtr7g3533 409 PANTHER LD18447P 36 405 - -
Mtr7g3533 409 TIGRFAM prfA: peptide chain release factor 1 54 405 IPR004373 GO:0006415|GO:0016149
Mtr7g3533 409 PANTHER LD18447P 36 405 - -
Mtr7g3533 409 SMART PCRF_a_2 112 227 IPR005139 GO:0006415
Mtr7g3533 409 Gene3D - 47 154 - -
Mtr7g3533 409 Coils Coil 100 120 - -
Mtr7g3533 409 Coils Coil 124 144 - -
Mtr7g3533 409 Gene3D - 258 353 - -
Mtr7g3533 409 Gene3D - 162 390 - -
Mtr7g3533 409 Pfam RF-1 domain 259 369 IPR000352 GO:0003747|GO:0006415
Mtr7g3533 409 SUPERFAMILY Release factor 76 396 IPR045853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3533 Mtr-Chr7 52326271 52330508 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3533 K02835 - gmx:100800412 634.409