Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3524 ATGGCGGAAACCTTTCTATTTACATCTGAATCAGTGAACGAGGGTCACCCCGACAAGCTGTGCGACCAGATCTCTGATGCAGTGCTCGATGCCTGTCTTGAACAGGATCCTGACAGCAAGGTTGCCTGTGAGACTTGCACCAAGACTAACATGGTCATGGTCTTTGGAGAAATAACAACCAAGGCCAATGTAGACTATGAGAAGATCGTTCGTGACACATGCCGCACCATTGGATTCATCTCTGATGATGTTGGTCTTGATGCCGACAAATGCAAGGTCTTGGTTAACATTGAGCAGCAGAGTCCTGATATTGCTCAGGGTGTTCACGGACACTTCACCAAGCGCCCGGAGGAGGTTGGTGCTGGTGACCAGGGTCACATGTTTGGCTATGCTACTGATGAAACCCCTGAATTGATGCCTTTGACCCATGTCCTTGCAACCAAACTTGGTTCTCGTCTTACCGAGGTTAGGAAGAATGGTACCTGCGCTTGGTTGAGACCTGACGGCAAGACACAAGTTACCATCGAGTACTACAATGAGAACGGTGCTATGGTTCCAGTTCGTGTCCACACTGTCCTCATTTCTACTCAACACGACGAGACTGTCAGTAACGACCAGATTGCTGCTGATCTTAAGGAACATGTTATCAAGCCTGTTATTCCCGAGAAGTACTTGGATGAGAAGACAATCTTCCACCTTAACCCTTCTGGACGCTTTGTCATTGGTGGTCCCCATGGTGATGCCGGTCTCACCGGAAGAAAGATTATAATTGATACTTATGGTGGCTGGGGTGCTCACGGTGGAGGTGCCTTCTCAGGAAAGGACCCAACCAAGGTTGACAGAAGTGGTGCCTATGTTGTAAGGCAGGCAGCCAAGAGTATAGTGGCCAACGGTCTTGCTCGCAGATGCATTGTTCAAGTTTCATATGCCATTGGTGTGCCTGAACCTTTGTCGGTCTTTGTTGACAGTTATGGAACTGGAAAGATTCCTGACAGGGAGATTCTTCAAATTGTGAAGGAGAATTTCGACTTCAGACCTGGAATGATCACCATAAACTTGGACCTTAAGAGGGGTGGCAACAGCAGGTTTCTTAAGACAGCTGCTTATGGACACTTTGGAAGGGATGATCCTGACTTCACATGGGAAGTTGTGAAACCACTCAAGTGGGAGAAGCCTCAAGCTTAA 1185 0.4802 MAETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRTIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEVGAGDQGHMFGYATDETPELMPLTHVLATKLGSRLTEVRKNGTCAWLRPDGKTQVTIEYYNENGAMVPVRVHTVLISTQHDETVSNDQIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILQIVKENFDFRPGMITINLDLKRGGNSRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3524 394 Gene3D - 118 382 - -
Mtr7g3524 394 Hamap S-adenosylmethionine synthase [metK]. 3 394 IPR002133 GO:0004478|GO:0005524|GO:0006556
Mtr7g3524 394 Gene3D - 5 243 - -
Mtr7g3524 394 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 4 3 394 - -
Mtr7g3524 394 SUPERFAMILY S-adenosylmethionine synthetase 4 110 IPR022636 GO:0004478|GO:0006556
Mtr7g3524 394 Pfam S-adenosylmethionine synthetase, N-terminal domain 5 102 IPR022628 GO:0004478|GO:0006556
Mtr7g3524 394 Pfam S-adenosylmethionine synthetase, C-terminal domain 241 382 IPR022630 GO:0004478|GO:0006556
Mtr7g3524 394 SUPERFAMILY S-adenosylmethionine synthetase 116 240 IPR022636 GO:0004478|GO:0006556
Mtr7g3524 394 Pfam S-adenosylmethionine synthetase, central domain 118 239 IPR022629 GO:0004478|GO:0006556
Mtr7g3524 394 PIRSF MAT 1 393 IPR002133 GO:0004478|GO:0005524|GO:0006556
Mtr7g3524 394 ProSitePatterns S-adenosylmethionine synthase signature 1. 120 130 IPR022631 GO:0004478|GO:0006556
Mtr7g3524 394 ProSitePatterns S-adenosylmethionine synthase signature 2. 267 275 IPR022631 GO:0004478|GO:0006556
Mtr7g3524 394 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 3 394 IPR002133 GO:0004478|GO:0005524|GO:0006556
Mtr7g3524 394 CDD S-AdoMet_synt 6 385 - -
Mtr7g3524 394 Gene3D - 12 280 - -
Mtr7g3524 394 SUPERFAMILY S-adenosylmethionine synthetase 241 391 IPR022636 GO:0004478|GO:0006556
Mtr7g3524 394 TIGRFAM metK: methionine adenosyltransferase 6 387 IPR002133 GO:0004478|GO:0005524|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3524 Mtr-Chr7 52221940 52224449 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3524 K00789 - rcu:8265897 771.155