Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3520 ATGTCGAGAAAAAGGTTGGAGGGTAAGGTTGCTATAGTGACTGGGGGAGCAAGCGGAATAGGGGCGGAGACAGCGAAGACATTCGTGGAAAATGGAGCATTTGTAGTTATAGCAGATATCAATGATGAATTGGGTCACCAAGTTGCAACTTCAATTGGGTTAGACAAAGTGAGTTACCACCATTGTGATGTGAGAGATGAAAAACAAGTTGAAGAAACAGTAGCTTTCGCATTGGAAAAATATGGAACCCTAGACATTATGTTTAGCAACGCTGGAATTGAAGGTGGTATGTCTAGCAGCATACTAGAATTTGATCTGAATGAATTTGACAACACCATGGCCATTAATGTTCGTGGATCACTCGCAGCTATCAAGCACGCTGCACGTTTCATGGTGGAGAGAAAAATCCGTGGATCCATAATTTGTACTGCCAGTGTAGCTGCCTCTGTTGCTGGAAATCGTGGCCATGATTATGTTACATCCAAACATGGTCTCTTAGGACTTGTACGTTCAACGTGTGGTGAGCTTGGAGCTTACGGAATTAGAGTCAATTCAATCTCACCGTATGGTGTTGCCACGCCTCTTGCATGTAGAGCACTGAATATGGAGATGAGTAAAGTTGAAGCTAATATGAAAGATTCTGCTAATTTGAAAGGAATTACACTAAAGGCTACGCATATTGCAGAAGCTGCTCTCTTTCTTGCATCGGAAGAATCGGCTTATATTAGTGGACACAATTTGGTGGTCGATGGAGGCTTTTCTGTTATTAATAGTTGTGTGCCTACTACTATTAAAAAATAA 801 0.417 MSRKRLEGKVAIVTGGASGIGAETAKTFVENGAFVVIADINDELGHQVATSIGLDKVSYHHCDVRDEKQVEETVAFALEKYGTLDIMFSNAGIEGGMSSSILEFDLNEFDNTMAINVRGSLAAIKHAARFMVERKIRGSIICTASVAASVAGNRGHDYVTSKHGLLGLVRSTCGELGAYGIRVNSISPYGVATPLACRALNMEMSKVEANMKDSANLKGITLKATHIAEAALFLASEESAYISGHNLVVDGGFSVINSCVPTTIKK* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3520 266 Pfam Enoyl-(Acyl carrier protein) reductase 15 254 - -
Mtr7g3520 266 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 145 173 IPR020904 GO:0016491
Mtr7g3520 266 Gene3D - 1 261 - -
Mtr7g3520 266 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Mtr7g3520 266 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
Mtr7g3520 266 PRINTS Glucose/ribitol dehydrogenase family signature 132 148 IPR002347 -
Mtr7g3520 266 PRINTS Glucose/ribitol dehydrogenase family signature 158 177 IPR002347 -
Mtr7g3520 266 PRINTS Glucose/ribitol dehydrogenase family signature 179 196 IPR002347 -
Mtr7g3520 266 PRINTS Glucose/ribitol dehydrogenase family signature 217 237 IPR002347 -
Mtr7g3520 266 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 255 IPR036291 -
Mtr7g3520 266 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 1 264 - -
Mtr7g3520 266 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 IPR002347 -
Mtr7g3520 266 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 IPR002347 -
Mtr7g3520 266 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 IPR002347 -
Mtr7g3520 266 PANTHER OXIDOREDUCTASE-RELATED 1 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3520 Mtr-Chr7 52156365 52157719 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3520 6 252 Acyl Lipid Metabolism Gene Families AT3G55290 29.478 9.09e-22 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3520 - - gmx:100798299 379.022