Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3506 ATGGCACCAGAGCTTGTTCCAACCGCTGCAAAATCAGTTACCGGATTCACGAAGCCAGTGACGATACCAAAACGTGCGTATGTAACGTTTCTTGCCGGTAACGGTGATTACGTGAAAGGTGTAATAGGTTTGGCGAAAGGTTTGCGGAAGGTGATGACGGCGTATCCGCTGGTTGTGGCGGTGCTTCCAGATGTACCGGAGGAACACCGTGAGATGTTGGAAGCTCAGGGATGTATTGTCCGTGAGATTGAACCGGTTAACCCACCCGAAAATCAGACTCAGTTTGCTATGGCGTATTACGTCATCAATTATTCCAAACTCCGTATATGGGAGTTTGTGGAATACAGCAAGATGATATACTTGGACGGAGACATTCAAGTTTATGAAAACATAGACCATCTCTTTGATCTACCAGATGGTCATTTCTACGCTGTTATGGATTGTTTTTGCGAGAGAACTTGGAGTCACACACCACAATACAAAATCGGTTATTGTCAACAATGTCCAGAAAAAGTTCATTGGCCAAAGGAAATGGGTCAACCTCCTTCACTTTACTTCAATGCTGGCATGTTCCTGTTTGAGCCAAGCATTGATACTTACCACGATCTTTTGAAGACACTTAAAGTTACTCCTCCTACTCCTTTTGCTGAACAAGATTTCTTGAATATGTATTTCAAGGATATTTATAAGCCAATCCCATTTGTTTACAATCTTGTTCTTGCTATGTTATGGCGTCACCCTGAAAATGTTGAGCTTCATAAAGTCAAGGTTGTTCACTATTGTGCAGCGGGATCAAAGCCTTGGAGATACACAGGGAAGGAAGAAAACATGCAAAGGGAGGATATAAGAATGCTAGTCAAGAAATGGTGGGATATTTACAATGATTCATCTCTTGATTACAACAAGAATTTGAGTGGAAGTGGTGAAGTACAAACGAATGGTTTTGAAATTGAGCCATTCGTACAAGCATTGTCTGAGGTAGGTCGTGTTCAATATGTCACAGCACCTTCAGCAGCTTAA 1020 0.4206 MAPELVPTAAKSVTGFTKPVTIPKRAYVTFLAGNGDYVKGVIGLAKGLRKVMTAYPLVVAVLPDVPEEHREMLEAQGCIVREIEPVNPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVYENIDHLFDLPDGHFYAVMDCFCERTWSHTPQYKIGYCQQCPEKVHWPKEMGQPPSLYFNAGMFLFEPSIDTYHDLLKTLKVTPPTPFAEQDFLNMYFKDIYKPIPFVYNLVLAMLWRHPENVELHKVKVVHYCAAGSKPWRYTGKEENMQREDIRMLVKKWWDIYNDSSLDYNKNLSGSGEVQTNGFEIEPFVQALSEVGRVQYVTAPSAA* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3506 339 CDD GT8_Glycogenin 25 296 - -
Mtr7g3506 339 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 298 IPR029044 -
Mtr7g3506 339 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 339 - -
Mtr7g3506 339 Pfam Glycosyl transferase family 8 29 271 IPR002495 GO:0016757
Mtr7g3506 339 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 23 302 IPR029044 -
Mtr7g3506 339 PANTHER GALACTINOL SYNTHASE 1 1 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3506 Mtr-Chr7 52051184 52053479 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3506 1 339 Glycosyltransferase AT1G56600 72.303 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3506 K18819 - gmx:100809287 615.92