Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3463 ATGGTGAACACAACATCTTCTTCCTCTCCTGTGAAAATCACTGTCTCTTCTGGAGGCAAAACTGGAGGAAGCAGAAACATGGGTTTAACAAGTCCACTACCACGTTCTTCAGTCTCTAACAACAACAATTCACCTCTCAGCAACCGTTCAAACCGGCTTTCCGGCGGCGGCGCCGCCATAAGAAGGTTATCAGGTGGTGGAGGTAACTATTCATCCATGTCCAAAGATGATGTTACAGAAGACACAACAACATCGGAATATGTTTCATACACAGTTCATATTCCTCCAACACCAGATCGCATGCCACTTTCATCTTCACAAACAAGCCTCCCCGAAGAAAACAACAAAAACAACAGTTTCATCTCTGGTACGATTTTTACCGGAGGTTTTAATTCTGTTACACGAGGCCATGTCATCGAATGCTCCAACGAAAGCAAAGATCTACCGTTAAAATCTAAACTGATGTGTGGAATGAAAGGCTGTGATGAAGAAGCGATCAAGGGTTGTACTTGTGAATGTGGTTTCAAGGTATGTAGGGATTGTTACAAAGAGATTTGTGGAAATGGAGGTGGTGGTAAATGTCCAGGTTGCAAAGATTCTTACAATAATGTTAGTGATGATGAAGAAGAGGAAGAGGAAGAGGTTTCTGAGTGCGAAGATCAAGCTCAACCGTTACCTTCTATGGCAGAATTCAAGTTGGACAAGAGGCTTTCTGTTGTGAAATCGTTTAAAGCTCAGAATCAGAACCATCCACCTGATTTTGATCATACTCGTTGGTTATTTGAAACTAAAGGAACTTATGGTTATGGAAATGCTGTTTGGCCTAAAGATGGATTTGGTTCCAATGGTTATGAACCTCCTCCTGATTTTGGAAAGAAATCTAGAAGACCCTTGACAAGAAAAGTTGGTGTTTCTGCTGCTATTCTCAGTCCTTATAGGTTGCTTATTCTGATGCGTCTTGCTGCACTTGGTTTATTCCTTACATGGAGGATTCGACACCCAAACCATGAGGCAATGTGGTTGTGGGCAATGTCAGTGACTTGTGAGCTATGGTTTGCATTTTCATGGCTTCTTGATCAGCTTCCAAAGCTGTGTCCTGTGAACAGAGTTACTGATTTGTCTGTTTTGAAAGAACGGTTCGAGTCTCCAAATCTGCGAAACCCGAAAGGGAGGTCTGATCTCCCTGGAATTGATGTCTTTGTTTCAACTGCAGATCCAGAAAAAGAGCCACCTCTTGTAACTGCAAACACCATTTTATCTATCCTTGCAGTTGATTATCCTGTGGAAAAAGTTGCTTGTTATTTGTCTGATGATGGTGGAGCTCTTTTGACATTTGAAGCTCTTGCTGAGACTGCTAGTTTTGCAAGATTTTGGGTTCCTTTCTGTAGAAAACACCAAATTGAGCCAAGAAATCCTGAAGCTTATTTCGGTCAGAAGCGCGATTTTCTCAAGAACAAGGTCCGGTTGGACTTTGTTAGGGAGAGGAGAAGGGTGAAGAGGGAATATGATGAATTCAAAGTGAGGATCAATTCCTTACCTGAATCAATAAGGAGAAGATCAGACGCTTACAATGCTCACGAGGAGTTGAGAGCCAAGAAGAAACAGATGGAAACCGGTTCAGATGTATCAGAACTCAAGGTTCCTAAAGCAACTTGGATGTCTGATGGTTCTCTTTGGCCTGGAACATGGTCATCAGCAGAACCTGACCACTCCAGAGGTGACCATGCTGGTATAATTCAGGCAATGTTGGCTCCACCAAATGTAGAACCAAAATATGGTTCAGAAGCTGATGGAGAGAACTTGATTGACACAACAGATGTTGATGTTAGGTTGCCAATGCTTGTTTATGTGTCTCGTGAGAAGAGGCCGGGATATGATCACAACAAGAAAGCTGGCGCCATGAATGCTCTTGTTCGAACTAGTGCTGTCATGTCCAATGGACCATTCGTTCTCAATCTTGACTGTGATCATTACATCTACAACTCCTTGGCCTTGAGGGAAGGTATGTGCTTTATGCTTGACAGAGGTGGTGACAGGATATGTTATGTTCAATTCCCTCAAAGGTTTGAAGGTATTGACCCCAGTGATCGATATGCAAACCACAACACCGTGTTCTTTGATGTGAGCATGAGAGCTCTTGATGGTTTACAAGGTCCAATGTATGTTGGAACTGGCTGCATATTCAGAAGAACAGCTCTATATGGTTTTAGTCCTCCTAGAGCTTCTGAACATCATGGGTGGTTTGGCAGGAGGAAGATTAAGTTGTTTCTGAGAAAATCAAAGGTGTCAAAAAAGGAAGAAGATGAAGTTTCTGTGCCAATCAATGATCACAATGACGACGATGCAGATATTGAGTCCTTGCTTCTTCCCAAAAGATTTGGAAATTCTTCTTATCTAGCTGCATCCATTCCAGTTGCAGAATTCCAAGGAAGATTGCTACAAGATTCCAAAGGAAATGGAACACAAGGAAGGCCTGCAGGTTCTCTTGCCGGGCCTCGCGAACCGTTAGATGCCGCTACCGTTGCTGAGGCAATTAGTGTCATATCTTGTTACTATGAGGATAAAACTGAGTGGGGGAAAAGAGTTGGATGGATATATGGTTCAGTTACAGAAGATGTTGTTACCGGTTACAGAATGCACAATAGAGGGTGGAGGTCAGTTTACTGTGTGACCAAAAGAGATGCTTTTAGAGGAACGGCTCCAATCAATTTAACAGATAGGCTACACCAAGTGCTTCGTTGGGCAACAGGGTCCGTCGAAATCTTCTTCTCAAGGAACAACGCGTTATTGGCAAGTCCTAGAATGAAATTCTTGCAAAGGGTGGCTTACTTCAATGTTGGAATGTACCCTTTCACTTCAATATTTCTGATTGTGTACTGCTTCCTACCTGCATTATCCTTATTCTCAGGACAGTTCATAGTCCAATCCTTGAGCGTAACATTTCTAGTATTCTTGCTTGGAATCACAGTCACACTATGCTTGCTTGCACTGCTTGAGATCAAATGGTCAGGAATCACTTTACATGATTGGTGGAGAAATGAACAGTTTTGGTTAATCGGCGGAACGAGTGCACATCCTGCAGCTGTTTTACAAGGCTTGTTGAAGGTGATAGCAGGAGTTGACATCTCATTCACACTAACATCAAAGTCAGCCACACCAGAAGATGGAGAAGATGAGTTTGCTGATCTTTATTTGGTGAAATGGAGCTTTCTAATGGTTCCTCCAATCACAATTATGATGGTGAACACTATTGCTATTGCAGTGGGAGTGGCTAGGACTCTTTATAGTCCATTTCCACAATGGAGTAGACTAGTTGGAGGGTTGTTTTTCAGCTTCTGGGTTTTGTGTCATCTTTATCCATTTGCAAAAGGGCTTCTGGGAAGAAGAGGAAAGGTTCCAACCATTATCTATGTTTGGTCTGGATTACTCTCAATCATTATTTCTATGCTTTGGGTTTATATTAACCCTCCTTCTGGTGCAAGACCACAGGATTATCTGAATTTTCAGTTCCCTTAG 3516 0.4243 MVNTTSSSSPVKITVSSGGKTGGSRNMGLTSPLPRSSVSNNNNSPLSNRSNRLSGGGAAIRRLSGGGGNYSSMSKDDVTEDTTTSEYVSYTVHIPPTPDRMPLSSSQTSLPEENNKNNSFISGTIFTGGFNSVTRGHVIECSNESKDLPLKSKLMCGMKGCDEEAIKGCTCECGFKVCRDCYKEICGNGGGGKCPGCKDSYNNVSDDEEEEEEEVSECEDQAQPLPSMAEFKLDKRLSVVKSFKAQNQNHPPDFDHTRWLFETKGTYGYGNAVWPKDGFGSNGYEPPPDFGKKSRRPLTRKVGVSAAILSPYRLLILMRLAALGLFLTWRIRHPNHEAMWLWAMSVTCELWFAFSWLLDQLPKLCPVNRVTDLSVLKERFESPNLRNPKGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKVACYLSDDGGALLTFEALAETASFARFWVPFCRKHQIEPRNPEAYFGQKRDFLKNKVRLDFVRERRRVKREYDEFKVRINSLPESIRRRSDAYNAHEELRAKKKQMETGSDVSELKVPKATWMSDGSLWPGTWSSAEPDHSRGDHAGIIQAMLAPPNVEPKYGSEADGENLIDTTDVDVRLPMLVYVSREKRPGYDHNKKAGAMNALVRTSAVMSNGPFVLNLDCDHYIYNSLALREGMCFMLDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVSMRALDGLQGPMYVGTGCIFRRTALYGFSPPRASEHHGWFGRRKIKLFLRKSKVSKKEEDEVSVPINDHNDDDADIESLLLPKRFGNSSYLAASIPVAEFQGRLLQDSKGNGTQGRPAGSLAGPREPLDAATVAEAISVISCYYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASPRMKFLQRVAYFNVGMYPFTSIFLIVYCFLPALSLFSGQFIVQSLSVTFLVFLLGITVTLCLLALLEIKWSGITLHDWWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDGEDEFADLYLVKWSFLMVPPITIMMVNTIAIAVGVARTLYSPFPQWSRLVGGLFFSFWVLCHLYPFAKGLLGRRGKVPTIIYVWSGLLSIIISMLWVYINPPSGARPQDYLNFQFP* 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3463 1171 MobiDBLite consensus disorder prediction 1 116 - -
Mtr7g3463 1171 MobiDBLite consensus disorder prediction 100 116 - -
Mtr7g3463 1171 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN D3 74 1160 - -
Mtr7g3463 1171 MobiDBLite consensus disorder prediction 67 91 - -
Mtr7g3463 1171 SUPERFAMILY RING/U-box 150 202 - -
Mtr7g3463 1171 Pfam RING/Ubox like zinc-binding domain 162 202 - -
Mtr7g3463 1171 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 74 1160 - -
Mtr7g3463 1171 Coils Coil 201 221 - -
Mtr7g3463 1171 MobiDBLite consensus disorder prediction 1 54 - -
Mtr7g3463 1171 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 601 749 IPR029044 -
Mtr7g3463 1171 SUPERFAMILY Nucleotide-diphospho-sugar transferases 412 963 IPR029044 -
Mtr7g3463 1171 MobiDBLite consensus disorder prediction 814 833 - -
Mtr7g3463 1171 Pfam Cellulose synthase 397 1161 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3463 Mtr-Chr7 51639370 51644371 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3463 35 1171 Glycosyltransferase AT3G03050 65.112 0.0 1532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3463 K00770 - gmx:100804687 1998.4