Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3452 ATGGCTTCTGCACCTTCCATGTCAGTTTCTTTGGAGTGTGTGAATGTATGCAATTCTTGGAGAGGAGATGGAAATGGAAGATATGATTGTAATCATCTATCGTGTGCGTCGAAAGCTCCTAGGGTTCTTACGGGTTTTCTTGCGAGCACGGCTCATCCTCATCAATATTTTTTGTTGAATGGTCGAAATGGAAGAAGGAACCAGTTTAATTTTGCATGTGAAGCTTTTAGTATAGTAGGTTCATATTCCGACAAAGCACTTGGCATCACACTTCACGAGGGATTCTCTGGATCTATCTTTTCTAGATTTGCATCTAGAGAATGGCAGCTGTCTTGTTCTTCGGTTTTTTCCTCGGATGTTGCCAGCGAGTTTTCCCCTGGAAGTTTGTGGGAGGATCTTAGGCCCGTGATCTCGTATCTTCCTCCTAAAGAACTGGAGTTAGTCCATAACGCTTTTACGTTGGCATTTAAAGCTCACGATGGTCAGAAAAGACGCAGCGGCGAACCCTTCATCATTCATCCGGTTGAGGTTGCACGGATTCTTGGAGAACTTGAACTTGATTGGGAGTCAATTGCTGCTGGATTACTTCATGACACGGTTGAAGATACAGATGTTGTGACTTTTGAGAGGATAGAGGAGGAATTTGGTGCTACAGTGCGCCACATTGTGGAAGGAGAGACTAAGGTGTCAAAGCTGGGGAAGTTGAAGTACAAGAATGAAAATGATTCTGTTCAAGATGTGAAAGCAGAGGACCTTCGGCAAATGTTTCTGGCTATGACAGAGGAGGTTCGTGTTATTATCGTCAAATTAGCAGACAGGTTACATAACATGCGCACTCTTTCACATATGCCTCCACATAAACAGAATAGCATTGCAATGGAGACATTACAGGTATTTGCTCCTTTGGCAAAGTTGCTTGGGATGTATCAAATTAAGTCAGAACTAGAAAATCTATCATTTATGTACACAAATCCTGAAGATTATGCAAAGGTGAAGAGAAGAGTTGCCGACCTATTCAAAGAACATGAGAAAGATCTTTTAGAGGCGAACAAAATATTGTTAAAGAAAATCCAAGATGATCAATTCTTAGACCTTATGACAGTTAAAACGGAAGTTCGTGCTGTGTGTAAAGAGCCTTACAGTGTCTATAAAGCTGTGCTCAAATCTAAAAGCTTGATCAATGAGATTAACCAAATTGCACAGCTTCGCATCATTATTAAACCAAAGCCGTGCGTTGGGGTTGGGCCTTTATGCAGTCCACAGCTGATTTGCTATCATGTTCTGGGGTTGATCCATGGAATCTGGACCCCTATTCCTAGATCTGTGAAGGATTACATTGCAACCCCTAAACCTAATGGGTACAAAAGTCTTCATAGCACTGTGATTCCATTTTTGTATGAGAGTATGTTCAGGCTTGAAATACAGATTAGAACAGAAGAAATGGATTTGATAGCTGAGAGGGGGATTGCAGCTCACTATAGTGGGAGAGAATTCGTTACTGGCTTGGTTGGAAGTGTAGTGCCCAGTGGCAAAAGCTCAAGGGGGAAGACAGTGTGTCTTAGCAATGCCAACATTGCACTCAGAATTGGCTGGCTCAATGCTATTAGAGAGTGGCAAGAAGAGTTTGTTGGCAACATGAGCTCTAGGGAATTTGTGGACACTGTTACAAGAGATCTTCTGGGCAGTCGTGTCTTTGTATTTACACCCAGTGGAGAGATTAAGAATCTTCCTCAAGGTGCTACAGTAATCGACTATGCTTATATGATACACACTGAAATTGGCAACAAGATGGTGGCAGCAAAGGTCAACGGAAATCTTGTTTCTCCTGCACGCGTGCTTGTAAATGCAGAAGTTGTGGAGATAATCACATATAATGCACTTTCTAGCAAATCCGCTTTTCAAAGGCATAAGCAGTGGTTGCAACATGCTAAAACACGGAGTGCGAGACACAAAATAATGAAGTTTCTGAGGGAGCAAGCTGCACTTTCCGCTGCTGATATCACTACAGAAGCTGTTAATGACTTTGTCAGTGATTCTGAGGAGGATAGTGAATCTGAAAAACTGTCAAATGGTTCCAGTAGTTCCAAACATAAAAGGGGGAAAATATTATTGAACGGTGTGGAAATATCAACTTCAGAAAGAAGCGAGTCTGTCCTTCAGAGTAAGAATGGAAGTGCTTGGACACCCAAGGTCAATGGAAAACACAATAAGCACGTGCATCATGTAAATTTGAAGGGCAAAGGGGACATGATGCTGCAGGGAAACCATGTTGCCAATATGATTCAAGTTAACAATCCAAAATATAAAGAAGTCCTGCCAGGTTTAGAAAGTTGGCAAGCCCATAAAATTGCCTCGTGGCACAATATAGAAGGGCATTCCGTCCAATGGTTATCTGCTGTATGCATAGACCGAAGAGGCATGATGGCTGAGGTCGCTACAGCATTGGCCACTTCAGACATAGCCATATGTTCTTGTGTGGCTGAGGTTGATGGTGGAAGGGGAATGGCTGTTATGTTATTTCAAGTTGAAGGAAATTTAGAAAATTTGGTGAGTGCTTGCTCTAGAGTAGATCAAATACCGGGTGTTTTGGGATGGTCTACTGGCTGTAGTTGGCCAAGCCTGATGGAAAACCATGGCGTTCTTGAATGCTAG 2652 0.4242 MASAPSMSVSLECVNVCNSWRGDGNGRYDCNHLSCASKAPRVLTGFLASTAHPHQYFLLNGRNGRRNQFNFACEAFSIVGSYSDKALGITLHEGFSGSIFSRFASREWQLSCSSVFSSDVASEFSPGSLWEDLRPVISYLPPKELELVHNAFTLAFKAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTDVVTFERIEEEFGATVRHIVEGETKVSKLGKLKYKNENDSVQDVKAEDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQNSIAMETLQVFAPLAKLLGMYQIKSELENLSFMYTNPEDYAKVKRRVADLFKEHEKDLLEANKILLKKIQDDQFLDLMTVKTEVRAVCKEPYSVYKAVLKSKSLINEINQIAQLRIIIKPKPCVGVGPLCSPQLICYHVLGLIHGIWTPIPRSVKDYIATPKPNGYKSLHSTVIPFLYESMFRLEIQIRTEEMDLIAERGIAAHYSGREFVTGLVGSVVPSGKSSRGKTVCLSNANIALRIGWLNAIREWQEEFVGNMSSREFVDTVTRDLLGSRVFVFTPSGEIKNLPQGATVIDYAYMIHTEIGNKMVAAKVNGNLVSPARVLVNAEVVEIITYNALSSKSAFQRHKQWLQHAKTRSARHKIMKFLREQAALSAADITTEAVNDFVSDSEEDSESEKLSNGSSSSKHKRGKILLNGVEISTSERSESVLQSKNGSAWTPKVNGKHNKHVHHVNLKGKGDMMLQGNHVANMIQVNNPKYKEVLPGLESWQAHKIASWHNIEGHSVQWLSAVCIDRRGMMAEVATALATSDIAICSCVAEVDGGRGMAVMLFQVEGNLENLVSACSRVDQIPGVLGWSTGCSWPSLMENHGVLEC* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3452 883 SUPERFAMILY ACT-like 795 863 IPR045865 -
Mtr7g3452 883 CDD TGS_RSH 565 623 IPR033655 -
Mtr7g3452 883 CDD NT_Rel-Spo_like 367 487 IPR007685 GO:0015969
Mtr7g3452 883 ProSiteProfiles TGS domain profile. 560 623 IPR004095 -
Mtr7g3452 883 SUPERFAMILY TGS-like 551 623 IPR012676 -
Mtr7g3452 883 SMART RelA_SpoT_2 377 499 IPR007685 GO:0015969
Mtr7g3452 883 SUPERFAMILY Nucleotidyltransferase 325 497 IPR043519 -
Mtr7g3452 883 SMART hd_13 166 286 IPR003607 -
Mtr7g3452 883 Gene3D Beta Polymerase, domain 2 325 479 IPR043519 -
Mtr7g3452 883 ProSiteProfiles HD domain profile. 170 277 IPR006674 -
Mtr7g3452 883 Pfam Region found in RelA / SpoT proteins 377 493 IPR007685 GO:0015969
Mtr7g3452 883 Gene3D - 557 632 IPR012675 -
Mtr7g3452 883 PANTHER GTP DIPHOSPHOKINASE RSH1, CHLOROPLASTIC-RELATED 1 883 - -
Mtr7g3452 883 CDD HDc 168 299 IPR003607 -
Mtr7g3452 883 MobiDBLite consensus disorder prediction 675 699 - -
Mtr7g3452 883 Pfam HD domain 151 308 - -
Mtr7g3452 883 Gene3D Hypothetical protein af1432 131 323 - -
Mtr7g3452 883 SUPERFAMILY HD-domain/PDEase-like 133 323 - -
Mtr7g3452 883 Pfam TGS domain 564 623 IPR004095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3452 Mtr-Chr7 51539736 51549481 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3452 180 495 EF-hand Containing Proteins AT3G17470 31.288 1.78e-37 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3452 K00951 - gmx:100786637 1454.88