Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3438 ATGAACCCGTCGAAACCTCCGCGTCGGAAAATCCCTCAGGCAAACGGCGATGACTCCGGTGACAAACTCGACCAGCTTCTTCTCTCCACCGCTATATCCAACAACGAAGACTTAGGTCCCTTCATCCGCAAAGCTTTCGCTTCCGGTAAACCGGAAACTCTCCAACAACACCTCAAGCACTTCGCTCGGTCCAAAGAATCCGAGATCGAAGAAGTCTGCAAAGCACACTACCAAGACTTCATTCTCGCCGTCGATGATCTCCGATCTCTTCTCTCCGACGTTGAATCTCTCAAGTCATCACTCTCCGATTCGAATTCCAAGCTTCAGTCCGTTGCTCGTCCTCTTCTAACATCACTCGATTCATTCGTCGAAACGCGTAACGTTTCGAAGAATGTTAACCTCGCTATCGATTCAGTTGAATCGTGTGTTCAGTTAACGGAAGTTTGTTCACGCGCGAACGCGCATCTCGCTGGTGACAACTTCTACATGGCGTTGAAGTGTGTGGATGCTATTGAGAGAGATTATTTGGATAAAACGGCGTCGTCGACTTTGAAGAAGATGCTTGAGAAGAAGATTCCAGAAATTCGTTCTTACATAGAGAGAAAAGTGAACAAAGAGTTCGGTGATTGGTTGGTTGAGATCCGTGTTGTAAGTCGCAATTTAGGTCAATTAGCGATTGGTCAAGCTTCATCAGCGAGACAGAGAGAAGAGGATCTTAGAATCAAACAGCGTCAAGCGGAGGAACAGAGTAGACTCAGTGTTAGGGATTGCATTTATGCTTTGGAGGAAGAAGATGAAGATGGAATGGCTTCCGATGACGGTTACAGTAATGGTAATGGTAACGTCGGTGGAGTTTTGGGATTTGATTTGACTCCTTTGTATAGAGCTTATCATATTCATCAAACGTTAGGGTTAGAGGATGGGTTTAAGCAGTATTATTTTGAGAATCGGAAGCTTCAGTTGACTTCGGATTTTCAGGTATCGTCCATGACGCCTTTTCTTGAATCGCATCAAACATTCTTTGCACAGATTGCAGGTTTCTTTGTGGTGGAGGATCGCGTGTTGAGGACTGGAGGTGGTTTGATATCGAAAATGGAAGTTGAGAACCTGTGGGAGATTGCTGTTAGCAAAATGTGTTCTGTGTTGGAGGATCAGTTCTCTAGAATGCAAACTGCCAATCATCTTTTGTTGATTAAGGATTATGTGAGTCTATTAGGAGTAACACTGCGTAGATTTGGTTACCCGATTGATGCGTTGCTTGATGTTTTAAGCAAGCATAGGGATAAGTATCATGAATTGCTGTTGTCAGATTGTAGGAAGCAGATAGCCGAGGCTATAGGTGGTGATAAGTTTGAGCAGATGTTGATGAAGAAAGAGTATGAATATTCAATGAATGTGCTTTCTTTTCAGATTCAAACATCGGATATCATACCTGCTTTTCCTTATTTGGCACCGTTTTCATCCACGGTGCCTGATTGTTGTCGCATTGTGCGGTCCTTCATCGAGGATTCAGTTAGCTTCATGTCATACGGCGGGCAGCTTGAGTTCTATGATGTTGTTAAGAAATATTTAGATAAGCTTTTGAGTGAGGTTTTAGATGAAGCTTTGTTAAAGCTTATTAATACCTCGGTTAGTGGTGTCACTCAGGCAATGCAAATGGCAGCAAATATGGCTGTTCTGGAGCGTGCATGTGATTTTTTCTTTCGCCATGCAGCACAGCTGTCAGGGGTTCCTTTGAGAATGGTAGAGAGAAGCCGGAGGCAATTTCCTCTGAGAAAAGCTCGTGATGCCGCGGAAGAGACACTGTCGGGGCTGCTCAAAGCCAAAGTTGATAGATTTATGACAATGATCGAGAATGTAAATTGGATGTCTGATGATCCGCCCCATGGTGGAAATGAATATATAAATGAGGTCATACTTTATTTAGAAACTGTGGTTTCAACTACTGCATCACAGATATTGCCAACTCAAGTCCATAAAAGAGTTCTACATGATGTTATTTCTCATATATCGGAGATGATTGTTGGGACTTTAGTTAGTGATTCTGTTAAAAGGTTTAATGTTAGTGCTATTAATGGAATTGATACAGACATCAAGCTCTTAGAATCATTTGTTGAAACTCAGGCAACCCTTTTCTTTGATGGGGATGCTGATCAGTTCAAATCAGCACTTGCTGAGGCAAGGCAAATGGTTAATTTGCTAGTAAGCAACCATCCGGAAAATTTTCTGAATCCAGTGATCAGGGAGAGGAGTTACAGTGCTTTGGACCACAAGAAAGTGGTGATTGTTTCAGAAAAGTTGAAGGATCCTTCGGATCGACTCTTTGGAACCTTTGGTAGTCGAGGGTCCAGGCAGAACCCAAAAAAGAAATCACTGGATACATTGATAAAAAGACTAAGGGATGTTAGTTGA 2412 0.4279 MNPSKPPRRKIPQANGDDSGDKLDQLLLSTAISNNEDLGPFIRKAFASGKPETLQQHLKHFARSKESEIEEVCKAHYQDFILAVDDLRSLLSDVESLKSSLSDSNSKLQSVARPLLTSLDSFVETRNVSKNVNLAIDSVESCVQLTEVCSRANAHLAGDNFYMALKCVDAIERDYLDKTASSTLKKMLEKKIPEIRSYIERKVNKEFGDWLVEIRVVSRNLGQLAIGQASSARQREEDLRIKQRQAEEQSRLSVRDCIYALEEEDEDGMASDDGYSNGNGNVGGVLGFDLTPLYRAYHIHQTLGLEDGFKQYYFENRKLQLTSDFQVSSMTPFLESHQTFFAQIAGFFVVEDRVLRTGGGLISKMEVENLWEIAVSKMCSVLEDQFSRMQTANHLLLIKDYVSLLGVTLRRFGYPIDALLDVLSKHRDKYHELLLSDCRKQIAEAIGGDKFEQMLMKKEYEYSMNVLSFQIQTSDIIPAFPYLAPFSSTVPDCCRIVRSFIEDSVSFMSYGGQLEFYDVVKKYLDKLLSEVLDEALLKLINTSVSGVTQAMQMAANMAVLERACDFFFRHAAQLSGVPLRMVERSRRQFPLRKARDAAEETLSGLLKAKVDRFMTMIENVNWMSDDPPHGGNEYINEVILYLETVVSTTASQILPTQVHKRVLHDVISHISEMIVGTLVSDSVKRFNVSAINGIDTDIKLLESFVETQATLFFDGDADQFKSALAEARQMVNLLVSNHPENFLNPVIRERSYSALDHKKVVIVSEKLKDPSDRLFGTFGSRGSRQNPKKKSLDTLIKRLRDVS* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3438 803 Gene3D Dsl1p vesicle tethering complex, Tip20p subunit, domain D 594 742 IPR042044 -
Mtr7g3438 803 Gene3D - 416 588 IPR042045 -
Mtr7g3438 803 PIRSF Sec15 4 803 IPR007225 GO:0006886|GO:0090522
Mtr7g3438 803 Pfam Exocyst complex subunit Sec15-like 462 767 IPR046361 -
Mtr7g3438 803 MobiDBLite consensus disorder prediction 1 22 - -
Mtr7g3438 803 PANTHER SEC15 7 803 IPR007225 GO:0006886|GO:0090522
Mtr7g3438 803 Coils Coil 229 249 - -
Mtr7g3438 803 PANTHER EXOCYST COMPLEX COMPONENT SEC15B 7 803 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3438 Mtr-Chr7 51438344 51441095 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3438 K19985 - gmx:100796432 1339.71