Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3424 ATGGATGTCGAGGAACAACGACCTTTTCCCATACCCAACAACGTTAAACGCTTCGGTCTTAAAAACTCTATCCAAACTAATTTCGGTGACGATTATGTTTTCCAAATCATCCCAAAGGATGATTGGAGTTCAATGGCGGTTTCACTTTCAACGAACGCAGTGAAATTGTATTCACCAGTGATGGGTCAATATTATGGAGAGTGCAAGGGTCACACTGCAACTATCAATCAGATTTTGTTTTCGGGTCATTCTAATCCCAATATTCTAAGCTCTTGTTCTTCAGATGGTACTATCAGGACTTGGGACACTAGAACATTTCAGCAGGTTTCTATTATCAATGCTGGTCCGTCTCAAGAAATCTTCAGCTTCTCTATTGGAGGACCTAGTGGAAATTTAGTTGCTGCGGGTTGTGATTCACAGGTACTCTTGTGGGATTGGAGAAATAACAAGCAAATTGCATGCCTAGAAGATTCTCATGTGGATGATGTCACTCAGGTTCATTTTATCCCTGAAGAACGAGGCAAGCTCATTTCTGCTTCAGTTGATGGATTGGTCTGCATATTTGATACCACTGGAGATATTAACGACGATGATCATCTAGAGTCGGTGATTAATGTGGGAACATCAATTGCAAAGGTGGGTTTTTTTGGAGAGAGTTATCAGAAGCTTTGGTGTTTAACTCATATTGAAACTCTCGGCATTTGGGACTGGAAAGAAGGAAGAAATGAAGTAAACTTCTCAGACACGCGTACTTTAGCTTCTGAAAGTTGGAATTTGGATCATGTTGACTACTTCGTTGATTGCCACTACTCAAGAGAAGCTGAAAAACTATGGTTGATCGGTGGCACAAATGCGGGTACTTTGGGTTTCTTTCCTGTAAATTACAGTGAAACGACAACAATTGGAGGTGCAGAAGCAATTCTCGAAGGTGGCCATACAGATGTTGTTAGAAGTGTTCTACCTATGTCCAGAGTTCATAGTTCAGGCATTTTTGGATGGACAGGTGGGGAAGATGGTAGGCTATGTTGTTGGCTGTCTGATGATGATTCCCCTCAAAAAAACCAATCTTGGATTTCAAGTTCATTGGTTATGAAACCGGAAAGAACTTGCAAGAAAAATCGCCATCACCCGTACTAA 1137 0.4116 MDVEEQRPFPIPNNVKRFGLKNSIQTNFGDDYVFQIIPKDDWSSMAVSLSTNAVKLYSPVMGQYYGECKGHTATINQILFSGHSNPNILSSCSSDGTIRTWDTRTFQQVSIINAGPSQEIFSFSIGGPSGNLVAAGCDSQVLLWDWRNNKQIACLEDSHVDDVTQVHFIPEERGKLISASVDGLVCIFDTTGDINDDDHLESVINVGTSIAKVGFFGESYQKLWCLTHIETLGIWDWKEGRNEVNFSDTRTLASESWNLDHVDYFVDCHYSREAEKLWLIGGTNAGTLGFFPVNYSETTTIGGAEAILEGGHTDVVRSVLPMSRVHSSGIFGWTGGEDGRLCCWLSDDDSPQKNQSWISSSLVMKPERTCKKNRHHPY* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3424 378 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 68 105 - -
Mtr7g3424 378 Pfam WD domain, G-beta repeat 65 102 IPR001680 GO:0005515
Mtr7g3424 378 ProSitePatterns Trp-Asp (WD) repeats signature. 89 103 IPR019775 -
Mtr7g3424 378 SMART WD40_4 105 145 IPR001680 GO:0005515
Mtr7g3424 378 SMART WD40_4 148 189 IPR001680 GO:0005515
Mtr7g3424 378 SMART WD40_4 61 102 IPR001680 GO:0005515
Mtr7g3424 378 SUPERFAMILY WD40 repeat-like 31 344 IPR036322 GO:0005515
Mtr7g3424 378 Gene3D - 120 364 IPR015943 GO:0005515
Mtr7g3424 378 Gene3D - 38 119 IPR015943 GO:0005515
Mtr7g3424 378 ProSiteProfiles Trp-Asp (WD) repeats profile. 68 111 IPR001680 GO:0005515
Mtr7g3424 378 PANTHER UNCHARACTERIZED 16 378 IPR039328 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3424 K24758 - gmx:100794786 658.292