Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3423 ATGCTTCCTCTTTCTCTTCTTAAGACCGCACAAGGCCACCCTATGTTGGTGGAGCTGAAAAATGGAGAGACATATAATGGCCATTTGGTTAATTGTGATACATGGATGAACATTCATCTCCGAGAAGTTATTTGTACCTCTAAAGATGGAGATAGATTTTGGCGGATGCCTGAATGCTACATACGGGGAAATACGATCAAGTACCTTCGAGTTCCTGATGAGGTTATTGATAAAGTTCAGGAAGAAAAGAGCCGTACAGATCGCAAGCCACCTGGTGTGGGACGTGGTAGGGGTAGAGGTAGGGAGGATGCTGCTGGTGCTGGTGGACGCCAAACAAAAGGCACTGGGCGTGGTTTTGATGATGGTGGTGCTAGAGGAGCCGGAGGCCGAGGCAGGGCTAGCCAAGGTGGAAAGCCTGGAGGAAGCAGAGGTGCTGGGCGAGGTAGAGGTTGA 453 0.4989 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEEKSRTDRKPPGVGRGRGRGREDAAGAGGRQTKGTGRGFDDGGARGAGGRGRASQGGKPGGSRGAGRGRG* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3423 150 Pfam LSM domain 6 70 IPR001163 -
Mtr7g3423 150 PANTHER SM-LIKE PROTEIN LSM4 1 139 - -
Mtr7g3423 150 MobiDBLite consensus disorder prediction 79 150 - -
Mtr7g3423 150 Gene3D - 1 83 - -
Mtr7g3423 150 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 1 139 IPR027141 GO:0006396
Mtr7g3423 150 CDD LSm4 2 77 IPR034101 GO:0000398|GO:0000956
Mtr7g3423 150 SUPERFAMILY Sm-like ribonucleoproteins 3 129 IPR010920 -
Mtr7g3423 150 SMART Sm3 5 71 IPR001163 -
Mtr7g3423 150 MobiDBLite consensus disorder prediction 79 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3423 Mtr-Chr7 51298711 51301706 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3423 K12623 - bvg:104899093 203.756