Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3412 ATGGCCACTCTTCCTGCTTCTCCTTCACCCCCTTGGCATACTAATCCTAACCCTAATAATAATAATCCCAATTCTATTTCAATTCCGAACCCTAATTTCCATCCTGATCAATCTCAAACCCTTGATTTCGATTCCCTTATGTCTCCCCAACCTCAATCCCCCTCCGCCACCACCACACCGCCGCTGCCTCCGTCGCTTCTTCAACTCTCCTTCAACCAAGACCACGCCTGCTTCGCCGCCGCCACAGACAACGGCTTCCGCATCTACAACTGCGACCCATTCCGCGAACTCTTCCGCCGCGAATTTGGCGGTGGAGGAATCGCTCACGTTGAGATGCTTTTCCGCTGCAATATCTTAGCACTTGTTGGTGGCGGCTCCCACCCTCAGTATCCTCCTAACAAAGTCATGATCTGGGATGATCATCAAGGTACTTGCATCGGTGAACTCTCCTTCCGTGCCGCTGTTCGTGGTGTTCGATTGCGTCGTGATCGGATAATTGTGGTTGTGGAACAGAAGATATTTGTTTATAATTTCGCTGATCTGAAGCTGTTGCATCAGATTGAAACTATTGCTAACCCTAAGGGTTTATGTTCAGTTTCACATGTTTCTGAATCTCTTGTTCTTGCTTGTCCTGGTTTGCATAAGGGTCAGATTCGTGTGGAGCATTTTGCACTGAAAAAAACTAAGTTTATTTCTGCTCATGATTCCAGAATCGCTTCGTTTGCTCTCACGCTTGATGGACAGTTAATCGCCACTGCCAGTGTCAAGGGTACGCTCATTCGGATTTATGATACTGATAGCGGCACCCTACTTCAGGAAGTTAGAAGGGGTGCAAATGCAGCAGAGATATATAGTTTGGCGTTTTCCTCCACAGCTCAGTGGTTAGCAGTTTCAAGTGACAAGGGCACTGTTCATGTCTTTAGCCTTAAGGTTAATTCAAGCGGTGTTCCTGAGAATGAAACATCACAAGGTTCATCATCTAGTTCAGATGCTGCCATTGTCCCTTCTAGCTCATCTCGCTCCTTCATTAAATTTAAAGGAGTGTTGCCCAAGTATTTCAATTCAGAGTGGTCAGTTGCTCGGTTTCACTTGCATGAGGGTACTCAGTACACAGTTGCTTTTGGTGTACAAAAGAATACAGTCATAATTCTTGGCATGGATGGAAGCTTCTATAGATGCCAATTTGATGCAGCGAATGGAGGGGAAATGACCCAGCTGGAACATCACAACATTTTAATTCCAGAAACTGCTTTATGA 1257 0.4582 MATLPASPSPPWHTNPNPNNNNPNSISIPNPNFHPDQSQTLDFDSLMSPQPQSPSATTTPPLPPSLLQLSFNQDHACFAAATDNGFRIYNCDPFRELFRREFGGGGIAHVEMLFRCNILALVGGGSHPQYPPNKVMIWDDHQGTCIGELSFRAAVRGVRLRRDRIIVVVEQKIFVYNFADLKLLHQIETIANPKGLCSVSHVSESLVLACPGLHKGQIRVEHFALKKTKFISAHDSRIASFALTLDGQLIATASVKGTLIRIYDTDSGTLLQEVRRGANAAEIYSLAFSSTAQWLAVSSDKGTVHVFSLKVNSSGVPENETSQGSSSSSDAAIVPSSSSRSFIKFKGVLPKYFNSEWSVARFHLHEGTQYTVAFGVQKNTVIILGMDGSFYRCQFDAANGGEMTQLEHHNILIPETAL* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3412 418 Pfam WD domain, G-beta repeat 277 307 IPR001680 GO:0005515
Mtr7g3412 418 MobiDBLite consensus disorder prediction 314 334 - -
Mtr7g3412 418 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 31 418 - -
Mtr7g3412 418 Gene3D - 48 390 IPR015943 GO:0005515
Mtr7g3412 418 SMART WD40_4 224 264 IPR001680 GO:0005515
Mtr7g3412 418 SMART WD40_4 267 308 IPR001680 GO:0005515
Mtr7g3412 418 SUPERFAMILY WD40 repeat-like 57 391 IPR036322 GO:0005515
Mtr7g3412 418 MobiDBLite consensus disorder prediction 1 65 - -
Mtr7g3412 418 MobiDBLite consensus disorder prediction 18 53 - -
Mtr7g3412 418 PANTHER WD REPEAT PHOSPHOINOSITIDE-INTERACTING-LIKE PROTEIN 31 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3412 Mtr-Chr7 51223070 51226144 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3412 K22991 - gmx:100781692 617.461