Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3391 ATGGCAGAAGGAGAGGAGCGAATTGAACTTAAATTCCGCATATATGATGGAACCGATATAGCACACGATACTTATCCAGCATCTACTACAACTGTGGGTGCCCTTAAGCAAAAGCTAATTACTGAGTGGCCTCAAGGCAAAACAGTTACACCAAAGTCAGTTAATGATATAAAGCTTATACATGCCGGTAAAGTTTTGGGAAACAGCGAAACGCTTGCTGAGTCCAGAATAACTATCGGTGACATCCCTGGTGCTATTACCATGCATGTTGTAGTACAGCCTCCTGTAGCTAAAAAGAAGACAGAGAAGAAGGAGAACAGGCAAAAGACAAATTCATGTGCATGCTCATGCACTATCCTATAG 363 0.4215 MAEGEERIELKFRIYDGTDIAHDTYPASTTTVGALKQKLITEWPQGKTVTPKSVNDIKLIHAGKVLGNSETLAESRITIGDIPGAITMHVVVQPPVAKKKTEKKENRQKTNSCACSCTIL* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3391 120 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 116 IPR040015 -
Mtr7g3391 120 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1 116 - -
Mtr7g3391 120 CDD Ubl_MUBs_plant 8 95 - -
Mtr7g3391 120 PIRSF MUB 1 120 IPR017000 -
Mtr7g3391 120 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 116 IPR039540 -
Mtr7g3391 120 Gene3D - 1 101 - -
Mtr7g3391 120 SUPERFAMILY Ubiquitin-like 4 98 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3391 Mtr-Chr7 51008856 51012147 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3391 - - gmx:100818909 169.859