Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3379 ATGGCAAACACTCAACCTTCATCTGCACCTTCTGGAGATGAAGTTAATGATACAAATGGAAATGAGAACTATCATGAAACTGAGCTTTTTGAGGACACCTTAGTGATTGATGATAAATTCACCGAAACTGGGTTGGAAATTCTCGATCTGAATAATACTGAGATTGTAGAGGATTCAGAGCCTGTAGAGGATATGATAACTGGTACAGCATGTGAGTATGAGACAGAAGTGGTGCTTGATAGCGAGGACGAAGAAATGAATAATACAGGCAAATTGACAGTTGGTGAAAGATTTCTTCAGGCTAAAAGTAGTCCAGCGGTGAACAATTCTTCGGTGCTCTTCAAGAAGAGATTGCCTAAGCTACCGTGTGAGCAAGATAACTCAAAATCAAATGCCACAACTTGTGGGAAAACTGGTACTGGTGACAAAGGAGCTTCAAATGATGCTGAGAGCTTTGATGACAACAACCATCAATATCCACCTGCTATGTCATATGATGCTCACTCACCAACCGTAGCTGCACTAGGTTTCGTGGATCAGTACTTGTCATCAATAGATGTGGATCTATTTCAAGGATTTCAAAATGGAAAGATTGCTATGGAGAAGTCACCTCAAGTCTCGAGTGCGAGAGGATCGATTAGTCTGGCTAAGAAAGTTAAAGCTCAAACGCAAAATGAAGATAAAGACCCATTCAAATGGGCTGACAAGGATCAAAATTTAAAAGAAGCTGGTATTTTCTGTAAAAAACTTGAAGCATCTTTCAATTTTGGAAGCCATGGACTGACGTATAAGAGAAGAAAACAGCAAAAAGGTAGTCGTCTTCAGAACCAAGGAAAATGTAGTGCAAGTAATGGATGTGATGAGAACCAAGGAAACTATAGTGATGAGAATTTAGTCCAAGAACCAACAATGGCAATTGACAATAATAACTCTCTCAAAGAGTTGTATGTTGAGTCGCGTGCCGCAAGAGACGATGTTGATATTTATTCTAGTGTAGCAGGTACAGAAGACATGTCTGATATTGGCTTAGACACTCAAATAGCTGCTGAAGCTATGGGTGCTTTAGCCAATCTGTCCCCTGTCGGCTTTCATTTCAGTGATGCTCACCAACCAAAGAACATGTTTGATGCATCTTTGAGTGATTTAAAACAAGCTCATAAGGAAAATTCTTCATTTAAAGAGAATCATGGTTCACATTCTATTGCACTAAAATCCAACAAGCGAAATGTATCTTCCTGTAGGTTCAGCAAAGTAACTTCTAAGTCCTCTAGCGAGCAAACTTACAATCAAGACTCAAATCTTGTCTCAGGGAAAATGAAAAAAATAATGGGAAGTAAGTCAACTATTGAAGGGCAGTTCAAAAATAATACCAGTTCATCAGTATGCAGTGAAAGTGTATCACATAAAGAGGTTTGCTTACTAGAAGAGGATATAAGTTTTCAACCTGCTTCCAAAGAGCCCAAAATCCAGAATAAGAGCAGATGGACAAGAATGACACATCAACCAAGCCATCCTATAGAGAAGAACAATAATGTTGAAGAGGATATAATTAGATATAAGAGGAAGGGAAAGTGTTTAGTGGCAGATCCAGTGGTGTCAGACGTTAAGACTAAACGTCTTAATTTATCTACTACCTCATATGGAGTGGCTAGGAAGAGCAGTTTGAACCACCAGATTGAATTTAGTCCGCAGATATCAGTTACAAGCAGTTTTTCAAAGATTGATTCTTGGGCTTGTCCAAAAGGACCAAGAGGTAAAAGAAAGCGAGCTAATGCCCCAAGAGTTTTGGGTATTGATGATAAAGAAAACAATGTCTATTCCACTAGAAGTTTAGAGGGCCGAAATGCTGTGCGTAAATCTCGTCTTCTCCCAGTTTCAGCTGGTGATGCTATAAAATTTGAAAACCTGCATGATATGCGTCCCTTGTTGCTGGCACATGTTGAAATATTATCAAACAAGAGTGTTGTACAATCGAGTTCAGAAATTTCCGCTTCAGTTGGTCCAAGTGAAGGCATAAAAATTTCAAATGCTAACCACACATGCAATGAGCACCGCAAAAAAGCATGTGAGAAAAACCTGCCAAAGTCTTCACTTTTGAAGGAACTTATCAGATTAGGTGTTCCCAAATCCACATCAGAAATGATGAGTAAAGATTTGAGACATCGAAGAGATATGACAAATGTTCGAGTTCTGTTTAGTCAACATTTGGATGACAATGTCCTCAAGCAGCAACAGAAGATCTTGGCGCGTCTTAATATATCTACTGCATCAAGCTCAATGGAAGCCACTCATTTCATAGCAGACAAGTTTACACGTACAAAGAATATGCTGGAAGCAATGGCTCTTGGTAACTTAGTATTGACACACTCATGGCTTGAGAGTTGTGGACAAGCCAACTTTTTGATTGATGAGAAAAATTATATTTTGAGGGATATGAAAAAGGAAAAGGAAATAGGCTTTAGCATGCCAGTTTCTCTTGCTCGAGCAAGACAAAAGCCACTCCTGAAGGGTAAACGAGTCTACATAACACCACACATCAAACCTAATAAGGAAGTGGTTGCAAGCTTGGTTACCGCTGTTCATGGTCAGCTAGTGGATGAAAATCAGATATTTGCAGACAAGAATGATAATATCTTAGATGATCTATTGATTCTTTCTTGTGAAGAAGACTTTGCAATATGCCGCCATTTCCTTAAGAGAGGAGCTGCTGTTTACAGTTCGGAGCTTGTTCTGAATGGAATTATTATCCAGAAATTGGAACTCGAGAGGCATAAACTGTTCGTGAATAAACTCAGTAGATGTAATTGGTTTGGGAAGGTTTACAGAAAGCGTTTGAGTCCTTTATCTTGA 2850 0.3905 MANTQPSSAPSGDEVNDTNGNENYHETELFEDTLVIDDKFTETGLEILDLNNTEIVEDSEPVEDMITGTACEYETEVVLDSEDEEMNNTGKLTVGERFLQAKSSPAVNNSSVLFKKRLPKLPCEQDNSKSNATTCGKTGTGDKGASNDAESFDDNNHQYPPAMSYDAHSPTVAALGFVDQYLSSIDVDLFQGFQNGKIAMEKSPQVSSARGSISLAKKVKAQTQNEDKDPFKWADKDQNLKEAGIFCKKLEASFNFGSHGLTYKRRKQQKGSRLQNQGKCSASNGCDENQGNYSDENLVQEPTMAIDNNNSLKELYVESRAARDDVDIYSSVAGTEDMSDIGLDTQIAAEAMGALANLSPVGFHFSDAHQPKNMFDASLSDLKQAHKENSSFKENHGSHSIALKSNKRNVSSCRFSKVTSKSSSEQTYNQDSNLVSGKMKKIMGSKSTIEGQFKNNTSSSVCSESVSHKEVCLLEEDISFQPASKEPKIQNKSRWTRMTHQPSHPIEKNNNVEEDIIRYKRKGKCLVADPVVSDVKTKRLNLSTTSYGVARKSSLNHQIEFSPQISVTSSFSKIDSWACPKGPRGKRKRANAPRVLGIDDKENNVYSTRSLEGRNAVRKSRLLPVSAGDAIKFENLHDMRPLLLAHVEILSNKSVVQSSSEISASVGPSEGIKISNANHTCNEHRKKACEKNLPKSSLLKELIRLGVPKSTSEMMSKDLRHRRDMTNVRVLFSQHLDDNVLKQQQKILARLNISTASSSMEATHFIADKFTRTKNMLEAMALGNLVLTHSWLESCGQANFLIDEKNYILRDMKKEKEIGFSMPVSLARARQKPLLKGKRVYITPHIKPNKEVVASLVTAVHGQLVDENQIFADKNDNILDDLLILSCEEDFAICRHFLKRGAAVYSSELVLNGIIIQKLELERHKLFVNKLSRCNWFGKVYRKRLSPLS* 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3379 949 CDD BRCT_MDC1_rpt1 728 802 - -
Mtr7g3379 949 MobiDBLite consensus disorder prediction 273 294 - -
Mtr7g3379 949 ProSiteProfiles BRCT domain profile. 720 809 IPR001357 -
Mtr7g3379 949 Gene3D BRCT domain 715 832 IPR036420 -
Mtr7g3379 949 PANTHER BRCT DOMAIN-CONTAINING PROTEIN-RELATED 5 930 - -
Mtr7g3379 949 MobiDBLite consensus disorder prediction 124 158 - -
Mtr7g3379 949 MobiDBLite consensus disorder prediction 1 18 - -
Mtr7g3379 949 SUPERFAMILY BRCT domain 716 825 IPR036420 -
Mtr7g3379 949 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 5 930 - -
Mtr7g3379 949 CDD BRCT_PAXIP1_rpt6_like 834 920 - -
Mtr7g3379 949 MobiDBLite consensus disorder prediction 124 161 - -
Mtr7g3379 949 Gene3D BRCT domain 833 934 IPR036420 -
Mtr7g3379 949 MobiDBLite consensus disorder prediction 265 294 - -
Mtr7g3379 949 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 715 809 IPR001357 -
Mtr7g3379 949 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3379 Mtr-Chr7 50931978 50937024 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3379 K14972 - gmx:102659913 1054.66