Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3373 ATGATGCTCAGAATTCGAAGCCGAGATGGTCTAGAACGAGTAACACTCGATAATCCAAACAACAAAACCGTCTCAGACCTCAAAACAATCATCGAAAAACAACTACGTATCCCCACACACAACCAAACCCTATCCACCAATCAAAACCTTCTCCTCGCTAAATCCCTTCAAGATCTTCTCCTATTCACCGACATGTCAAACCCTAACACTCCCTTAACAGCTTTAAACCTCTCTCACGGTTCAATCATCTTTTTAGCTTACGAAGGTGAACGTACTGTTCAAGGTCCCGCTGCTTTCTCACCCGCCGGTTCATTCGGTAAGAAAATGACTATGGATGATCTCATCGCGAAACAGATGCGTGTTTCGCGACAAGAGAATCCACATTGTGAATTGGTTTCATTTGATCGCGATTGTGCAAATGCTTTTCAGCATTATGTCAATGAGAATCTTGCTTTTGCTGTGAAAAGGGGTGGGTTTATGTATGGTACTGTTACTGAAGAAGGAAAGGTTGAGGTGAATTTTATATATGAACCTCCGCAACAAGGTTTGGAGGATAATTTATTGTTTTTTAGGGATCCTGAGGAAGAGAAATGTGTTGAAGCCATTGCGGCTGGATTAGGGATGAAGAGGGTTGGGTTTATTTTTACTCAAAGTGTGAGTCAGGATAAAAAGGATTATACTTTATCTTATAGGGAAGTGCTGCAAGCTGCTGAGTATCATGCTGAGAGTGGTTTGAAGGAATGGGTTACCGCGGTTGTGAAGCTCGAGGTGAATGAGGAAATGGGTGGTGCTGATGTTCATTTTGAAGCTTTTCAGATGAGTGATGTTTGTATTAGGTTGTTTAAGGAAGGGTGGTTTGATACTGAGGTTAAGGAGGATCATGATCCTAAGTTGTCCATCATGAAGAAGGATGTTGTTGTTGGTGTGAAGGATACTAAAGAGGTTGATAATGATTTTTTCTTGGTTGTTGTTAAAATCTCTGATCATCAGGGTCCTCTTTCGTCAACATTTCCCGTTGAGAACCGGAATACTCAAGTGACTGCGATGGCACTGAAGAATCATCTTGAACGGACTAAAAATCTTCCATTTGTGAAGCGAATTTCAGATTTTCATCTTCTTCTTGTATTAGCGAGGGTTTTGGATGTGTCTGCTGATGTTCCTGCATTGACCGAATGTGTGCAGACACAGAGTGCTGTACCTGAAGGTTACCAGATCCTTATTGAGTCCATGGCTAGCGCTGCTTGA 1245 0.4193 MMLRIRSRDGLERVTLDNPNNKTVSDLKTIIEKQLRIPTHNQTLSTNQNLLLAKSLQDLLLFTDMSNPNTPLTALNLSHGSIIFLAYEGERTVQGPAAFSPAGSFGKKMTMDDLIAKQMRVSRQENPHCELVSFDRDCANAFQHYVNENLAFAVKRGGFMYGTVTEEGKVEVNFIYEPPQQGLEDNLLFFRDPEEEKCVEAIAAGLGMKRVGFIFTQSVSQDKKDYTLSYREVLQAAEYHAESGLKEWVTAVVKLEVNEEMGGADVHFEAFQMSDVCIRLFKEGWFDTEVKEDHDPKLSIMKKDVVVGVKDTKEVDNDFFLVVVKISDHQGPLSSTFPVENRNTQVTAMALKNHLERTKNLPFVKRISDFHLLLVLARVLDVSADVPALTECVQTQSAVPEGYQILIESMASAA* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3373 414 CDD MPN_NPL4 120 376 IPR007717 -
Mtr7g3373 414 SUPERFAMILY Ubiquitin-like 1 90 IPR029071 -
Mtr7g3373 414 ProSiteProfiles MPN domain profile. 131 277 IPR037518 -
Mtr7g3373 414 Gene3D - 1 101 - -
Mtr7g3373 414 CDD Ubl_AtNPL4_like 1 85 - -
Mtr7g3373 414 Pfam Nuclear pore localisation protein NPL4 1 51 IPR024682 -
Mtr7g3373 414 ProSiteProfiles Ubiquitin domain profile. 1 85 IPR000626 GO:0005515
Mtr7g3373 414 Pfam NPL4 family 158 231 IPR007717 -
Mtr7g3373 414 PANTHER NUCLEAR PROTEIN LOCALIZATION 4 104 411 IPR016563 GO:0006511
Mtr7g3373 414 PANTHER NUCLEAR PROTEIN LOCALIZATION 4 2 95 IPR016563 GO:0006511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3373 K14015 - gmx:100779549 692.189