Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3333 ATGGTTTTCTATGGTGTCTCCAATTTCATCACCCTCTTCCTTCTCTTCCTCCTTCCCCTCCACTCCGCATTACCCCCCACCACCACCGTACAAATCAACTCCAACTCCATCCTCGTTGCACTTCTCGATTCCCACTACACGGAACTTGCCGAGCTCGTTGAAAAGGCACTTCTCCTTCAAAAACTAGAAGAAGCCGTCGGTAATCACAACATCACCATCTTCGCACCCAGAAATCAAGCTCTAGAACGTGACCTTGACCCTGAATTCAAGAGATTCCTTTTGGAACCACGTAATCTCAGGTCACTCCAAACTCTTTTAATGTCTCACATTCTTCCTTCAAGAATCGCTTCACATCATTGGCCACCAACTCACCTCCACCACCACACTCTCTCCAACCACCGTCTCCATCTCACCACAAACCCCACCGGCGCTAAAACCGTCGATTCCGCTGAGATCCTCAAACCAGACGACGTTATCCGTCCAGACGGCGTCATCCACGGCATCCAACGTCTCATAATCCCACGCTCCGTACAAGAAGATTTCAACCGGAGAAGAAACCTCCGTGACATCTCCGCAATTCTTCCAGAAGGAGCACCGGAGGTAGATCCACGTACAAACCGCTTAAAGAAACCCGCACCAGTCCCCGCCGGAGCTCCACCGGTTTTACCAATCTACGACGCATTAGCACCAGGACCATCACTAGCTCCAGCCCCAGCACCAGGTCCAGGTGGTCCACGTCATCATTTCAACGGCGAACGTCAAGTAAAGGATTTCATCCAAACTCTTCTCCATTACGGTGGTTACAATGAAATGGCGGATATTCTGGTTAACCTAACGTCGTTAGCAACGGAAATGGGTCGTTTAGTTTCTGAAGGATATGTTTTAACAGTTTTGGCACCAAACGATGAAGCAATGGCGAAATTAACGACTGATCAATTATCGGAACCAGGTGCACCGGAACAGATTATATACTATCATATAATTCCTGAGTATCAAACTGAGGAGAGTATGTATAACGCCGTTAGAAGATTTGGGAAAATTAGTTATGATACGTTGCGTTTGCCCCATAAGGTTGTTGCTCAGGAATCTGACGGTTCTGTTAAATTTGGTCACGGTGATTCTTCTGCTTATTTGTTTGATCCTGATATTTACACCGACGGTAGAATTTCCGTTCAAGGTATTGACGGTGTTCTTTTGCCACCGGAGGAAGAGAATGAAGATGAATCATCAACACCTATTCGCCGTGTTAAAACTCCACTTGTTAAAGTTGCTTCTAAACCAAGGAGAGGGAAATTGCTGCAACTTGCTTGTAGCATGGTTGGATCCTTTGGAAGAGTCTGCTCATGA 1347 0.4677 MVFYGVSNFITLFLLFLLPLHSALPPTTTVQINSNSILVALLDSHYTELAELVEKALLLQKLEEAVGNHNITIFAPRNQALERDLDPEFKRFLLEPRNLRSLQTLLMSHILPSRIASHHWPPTHLHHHTLSNHRLHLTTNPTGAKTVDSAEILKPDDVIRPDGVIHGIQRLIIPRSVQEDFNRRRNLRDISAILPEGAPEVDPRTNRLKKPAPVPAGAPPVLPIYDALAPGPSLAPAPAPGPGGPRHHFNGERQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHIIPEYQTEESMYNAVRRFGKISYDTLRLPHKVVAQESDGSVKFGHGDSSAYLFDPDIYTDGRISVQGIDGVLLPPEEENEDESSTPIRRVKTPLVKVASKPRRGKLLQLACSMVGSFGRVCS* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3333 448 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 17 3 445 - -
Mtr7g3333 448 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 3 445 IPR044654 -
Mtr7g3333 448 ProSiteProfiles FAS1/BIgH3 domain profile. 255 398 IPR000782 -
Mtr7g3333 448 SMART fasc_3 72 175 IPR000782 -
Mtr7g3333 448 SMART fasc_3 296 401 IPR000782 -
Mtr7g3333 448 SUPERFAMILY FAS1 domain 234 402 IPR036378 -
Mtr7g3333 448 Pfam Fasciclin domain 280 400 IPR000782 -
Mtr7g3333 448 Pfam Fasciclin domain 45 174 IPR000782 -
Mtr7g3333 448 ProSiteProfiles FAS1/BIgH3 domain profile. 33 172 IPR000782 -
Mtr7g3333 448 SUPERFAMILY FAS1 domain 34 175 IPR036378 -
Mtr7g3333 448 Gene3D FAS1 domain 37 174 IPR036378 -
Mtr7g3333 448 Gene3D FAS1 domain 274 401 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3333 Mtr-Chr7 50490099 50493170 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3333 - - gmx:100800956 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3333 7 50490099 50493170 Mtr7g3333 7 50490099 50493170 ECH