Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3323 ATGACCCGATTGACGGAGAAGCTCCGTTTGTCGTTCTACATACCGACCCGTTTTCTCTCTCTTCTTTCTCTCTCCTCTACTCTCCATCTCTGCAACTCCATTGCTCGTTTTCTACACTCCCAAACCCTACTACCTTTCTTCTTCTCCATGGACAATAATCTCTTCTCCGATAACGTTGATGACTTCTCCGATGACTTAGATTCATCCTCTTACTCCCTCCGTCTTAACCGTCGCTTACCCGACTCCGATCACCTGGATTTCGCACTTGATAGGGTTTACCTTCTCCCCTACAGGTGGTGGATTGATGCAGAAGGTGAAGGTGATCGTGTGGAAGGTGTTTTGTATACAGTTTGTTCGAATGACGATTCCGAGTCTGAGATTTTGCTTCATCTGAAGAAGGAAGAGGATTCTGAGAAGATTAAGAGTTTGGAGGCAGGGTTTTTGGGGCGGCATTATGCTTTGGTTCCTGAAGGTGTTTGGTTGCGTGCTCTCAAACGGTATAATGATTTTAATAATGCAGCGAAAGATTTTGTGAGACTCTTCTATGCAGAGGATTGTTTACCAGATTTGTTCCCTTTGCAACTTAGGATATTTGTTTCATGGGAAACCAGTTCACTGGTAGCAAAGATAAGCGAAAAGGAAAATGTGCCTGAATTCTACAAGAAAGCTTGTGACATTTTCAATTCTGCATATGACTCATTGTATATTTGGGACTTCTCTGGGCAGACTACCCAGCTTTTACTAAATGACAAACCTAGGGTGCCAAACGATTCTTCCGGTCAACCTGGAAAAGAGGTTCTTTTGGAGTTACAAGTTCATGGACTTGCAGATTCAATGAAGGGTAGTCAGAGCAATGGGATGGTTACAGATAGGTCTCAGATGGAATGTACTTCTAACGGAGACCCTGTTACGATGAACGGAAGCACCGGCGCTGTTATCCCCTATGTAACAGCAAACAACTATTTTCAAGGCAGTAGCTATAGAGCAGTTCGATCTTTAGGCTTGACAGGATTACATAATCTTGGAAATACCTGTTTTATGAATAGTGCCATTCAGTGTTTGGCTCACACCCCAAAACTTGTTGATTTTTTCCTTGGAGATTATCGTAGAGAGATAAATTATGAAAATCCCTTGGGAATGAATGGAGAACTTGCTTTATCTTTTGGAGATTTACTTAGACAGCTGTGGGTTCCTGGAGCATCACCTTTGGCACCAAAAATGTTCAAGATGAAACTGGCTAACTTTGCTCCTCAGTTCAGTGGTTATATGCAACACGATTCTCAAGAACTGCTTGCTTTTTTGTTGGATGGACTACATGAAGACCTTAATCGTGTAAAACGCAAGCCATATCATGAAGTTAAGGATGCAGATGGTCGTCCAGATGGAGAAGTGGCAGAAGAGTATTGGCGAAATCACCTTGCTCGCAATGACTCAATAGTAGTTGATTCGTTCCAAGGTCAGTTCCGGTCAACATTGATTTGCCCTTTTTGCAAGAAGGTTTCTATCACCTTTGACCCTTTTATGTACCTGTCTCTGCCATTGCCTTCTACAACGACACGAACAATGACTGTAACTGTCATCAGCACTGATGGGGTCACATTGCCTTCTGCAATTACCGTAACAGTGCCGGAAAGTGGAACACTTAAGGATCTAATTGGGGCCTTAGCTGCTTCTTGTTCTCTGAGAGATGATGAAACCCTCTTGGTGGCTGAGATTTACACGAATAAGATTTTTCGGGTATTGGAGGACAAATCTGACTCATTAGCTGATATCAGAGATCTAGACAAACTTGTCGCTTACCGAGTGCAGAAGTATACTGAAGATAGCCCTGTGGTTGTTTTCAGGCATGAACTTGTGGTGGAAATTTACAAGGGGAGGTTTGATAGTAAAATCTTTGGTTCTCCACTTGTAGCAAGGGTGTCCGGTATTTCTTGCGGAGATGATCTTCGTAGGGAGTTTCTAAATTTAATGAATCCATTTCTGATGCAAAACTCTGAAGAAACAAAAGACGAGTATGACAAGGATGAGGATGTTGATGGTGATGATACTAAAAAACTAAATGAAGTTGATGAATTAGGCGAAACTGATAACTCTGAAGCAATAGAAAGTGATGCAGTGTCGAATAGCGGTGCAGAGGATGACATACATTTGTGGACCGACTTCGAATTCTATTTATTACTTCCTGGGAGAGGTGGGACTTATAAGATAACATCGAAAGAACCATTACCTGCCGCAATGTTGTCCGGAAATCTGGAGGTAGCTGTCGTATGGTCAGATAAGATGCTTAAAAAGTATGACATGAGCCTGCTTGATCCATTGCCTCAGGTTTTCAGGCCCCAATTAATCACCAAGAGAACACAAGAATCAATATCTATTTACAAGTGCCTTGAAGCCTTCTTGAGAGAGGAACCTCTTGGGCCAGAAGACATGTGGTACTGTCCTACCTGCAAAGAACATCAGCAAGCAACTAAAAAGTTGGACCTTTGGAGATTGCCTGAAATTCTTGTTGTTCATTTGAAGAGGTTCTCATACAACCGATTTTTCAAGAATAAGCTGGAAACTTTCGTTGACTTTCCAACTAATGATCTGGATTTGTCAACCTTTGTCGCTCACCAGACTTGTCCATCTCCAAACTGTTATATGTTATATGCAATTATTTGTCACTATGGCGGGTTAGGAGGAGGTCACTATACAGCGTTTGTCCGTTATGGCCATGATAAATGGTATGAGTTTGATGATAGCAGGGTTGCCCCTGCTGATGAGGAGACAATAAAGACTCCTGCTGCTTATGTTCTTTTCTACAAGAAAGTTCAGATGAAGACGAAAACCTTAGGTTCAGCTGTGTAA 2847 0.4215 MTRLTEKLRLSFYIPTRFLSLLSLSSTLHLCNSIARFLHSQTLLPFFFSMDNNLFSDNVDDFSDDLDSSSYSLRLNRRLPDSDHLDFALDRVYLLPYRWWIDAEGEGDRVEGVLYTVCSNDDSESEILLHLKKEEDSEKIKSLEAGFLGRHYALVPEGVWLRALKRYNDFNNAAKDFVRLFYAEDCLPDLFPLQLRIFVSWETSSLVAKISEKENVPEFYKKACDIFNSAYDSLYIWDFSGQTTQLLLNDKPRVPNDSSGQPGKEVLLELQVHGLADSMKGSQSNGMVTDRSQMECTSNGDPVTMNGSTGAVIPYVTANNYFQGSSYRAVRSLGLTGLHNLGNTCFMNSAIQCLAHTPKLVDFFLGDYRREINYENPLGMNGELALSFGDLLRQLWVPGASPLAPKMFKMKLANFAPQFSGYMQHDSQELLAFLLDGLHEDLNRVKRKPYHEVKDADGRPDGEVAEEYWRNHLARNDSIVVDSFQGQFRSTLICPFCKKVSITFDPFMYLSLPLPSTTTRTMTVTVISTDGVTLPSAITVTVPESGTLKDLIGALAASCSLRDDETLLVAEIYTNKIFRVLEDKSDSLADIRDLDKLVAYRVQKYTEDSPVVVFRHELVVEIYKGRFDSKIFGSPLVARVSGISCGDDLRREFLNLMNPFLMQNSEETKDEYDKDEDVDGDDTKKLNEVDELGETDNSEAIESDAVSNSGAEDDIHLWTDFEFYLLLPGRGGTYKITSKEPLPAAMLSGNLEVAVVWSDKMLKKYDMSLLDPLPQVFRPQLITKRTQESISIYKCLEAFLREEPLGPEDMWYCPTCKEHQQATKKLDLWRLPEILVVHLKRFSYNRFFKNKLETFVDFPTNDLDLSTFVAHQTCPSPNCYMLYAIICHYGGLGGGHYTAFVRYGHDKWYEFDDSRVAPADEETIKTPAAYVLFYKKVQMKTKTLGSAV* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3323 948 MobiDBLite consensus disorder prediction 678 692 - -
Mtr7g3323 948 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 336 937 IPR028889 -
Mtr7g3323 948 MobiDBLite consensus disorder prediction 665 708 - -
Mtr7g3323 948 CDD Peptidase_C19R 765 935 - -
Mtr7g3323 948 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 337 352 IPR018200 GO:0004843|GO:0006511
Mtr7g3323 948 Gene3D Cysteine proteinases 654 944 - -
Mtr7g3323 948 Gene3D Cysteine proteinases 323 565 - -
Mtr7g3323 948 Pfam Ubiquitin carboxyl-terminal hydrolase 336 934 IPR001394 GO:0004843|GO:0016579
Mtr7g3323 948 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 53 939 - -
Mtr7g3323 948 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 880 897 IPR018200 GO:0004843|GO:0006511
Mtr7g3323 948 SUPERFAMILY Cysteine proteinases 334 936 IPR038765 -
Mtr7g3323 948 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 53 939 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3323 Mtr-Chr7 50393745 50401730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3323 781 943 Miscellaneous Gene Families AT4G31670 30.723 4.35e-19 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3323 - K21343 cam:101507058 1470.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3323 7 50393745 50401730 Mtr7g3323 7 50393745 50401730 ECH