Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3281 ATGTGTAACCGCAAAAAAACCCTAACGGAATCGATTCCTCTTTCACCACGATCCAGTAATGGTTCCATTCTTACAAGATCAGTGTGGAGTTCAAATCTTGATCACGAATTCGAGTTGATTCGATCGTTAATCGATCAGTATCCGCTAATTTCAATGGACACGGAGTTTCCCGGTGTGATTGTGAGGGCGGATCCCGGTGATTCGCCGTTCAAGAACCGTGGCGCGTGTCTTTATGCAGTGTTGAAGGCGAATGTGGATAGGTTGAATTTGATTCAGATTGGGTTAACTCTTTCTGATCATAAAGGTAATCTTCCAACGTTAGATACTGAAAATAGTTATATTTGGGAGTTTAATTTTAAGGATTTTGATGTGGCGCGTGATGATCATGCTGCTGATTCTGTTGAGTTGTTGAGGAGACAAGGGATTGATTTTGAGAAGAATCGTGAGTGCGGGATTGATTCTGTTAAGTTTGCTGAGTTGATGATGTCTTCCGGTTTGGTTTGTGCTGATTCTGTTAGCTGGGTAACGTTTCATAGTGCGTATGATTTCGGGTATTTGGTGAAATTGCTGACGCAGAGGCTGTTACCGGATGATTTGGAGGAGTTTTTGAGGCTGGTAAAGGTGTTTTTCGGTGATAAGGTTTTCGATGTGAAGCATTTGATGAGGTTTTGCACGAATTTGCATGGTGGATTGGACAGGGTTTGTCGGAGTTTGAAGGTGGAGAGGCTTATAGGGAAGAGTCATCAAGCTGGTTCGGATAGTTTGCTTACTTTGCATGCTTTTCAGAATATCAGAGAGCTTTACTTTGGGAAAGCAGACGGGTTTGTCAAATATGCCGGTGTATTGTATGGATTAGAAGTTCGCTGA 867 0.4256 MCNRKKTLTESIPLSPRSSNGSILTRSVWSSNLDHEFELIRSLIDQYPLISMDTEFPGVIVRADPGDSPFKNRGACLYAVLKANVDRLNLIQIGLTLSDHKGNLPTLDTENSYIWEFNFKDFDVARDDHAADSVELLRRQGIDFEKNRECGIDSVKFAELMMSSGLVCADSVSWVTFHSAYDFGYLVKLLTQRLLPDDLEEFLRLVKVFFGDKVFDVKHLMRFCTNLHGGLDRVCRSLKVERLIGKSHQAGSDSLLTLHAFQNIRELYFGKADGFVKYAGVLYGLEVR* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3281 288 Pfam CAF1 family ribonuclease 28 152 IPR006941 -
Mtr7g3281 288 Gene3D - 13 287 IPR036397 GO:0003676
Mtr7g3281 288 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED 16 287 - -
Mtr7g3281 288 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 16 287 IPR039637 GO:0004535|GO:0030014
Mtr7g3281 288 MobiDBLite consensus disorder prediction 1 21 - -
Mtr7g3281 288 SUPERFAMILY Ribonuclease H-like 18 286 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3281 Mtr-Chr7 49925305 49926663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3281 K12581 - gmx:100790027 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3281 7 49925305 49926663 Mtr7g3281 7 49925305 49926663 ECH