Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3278 ATGGGTAACGCTCAGTCTCCTCCCACTGATCCTCGATATCTTTCAGCATCCAGAGCTTTTGCTCAAAAGGGACTTGAAAACTTAAAATCACTATTCGATTCATTGGCATCTCAATCACATAGCAATGGAAAATACATCACTCCTTCAGTTTTTCAGTCATATTTCAAACTCAATGGTCCTATTGGGGAGAGGATGTTTGATTTGGTTACTCAGGAGCGTAAGGATCAAAAGTTAACCTTTGAAGACCTTGTTATTACTAAAGCTACTTATGAGAAAGGAACAAAAGATGAAATTGAAGAATTCATTTTTCGGTTATTAGATCTATCGGGAGATAATTTTGTAGGAAGGTCAGATTTGGAATCGGTACTAATTGCCATTTTTAACGATATATTATGCATAGAAGGTTCTGAACATGGATCAAGTTCACATCAAGATATTGTCAACATATTTCTGAGTGCTGCCAATTTTTCCATACATGATGAAAAGTGCACTGAGGAGGCTATGTCTTTTGATGATTTCAGAAGTTGGTGTACTCATCTCCCAACTGTGAGAAAGCTTCTTGGAAGCTTGCTTTTGCCACCTGATTCAGGACGGCCAGGTACTCAAATTCCTAATCTACTAACCCCGAAGGATATTGATTCTAACATTGTGCTTTTGAGAAAAGAGTATGCTTGGCATATAGGAGGAGCACTTTCCCAGCATGAGTTGGAAGATTGGATGCTTTTATATCATAGTTCTGTTAATGGTCTTAGTTTCAATACATTCTTGGGCAACATTTCAAATCATGAAGGCCCAACTGTGCTAATTCTTAAGGATAAAGATGGTTATATATATGGAGGATATGCTTCTCAACAATGGGAGCGGCATGCTGAATTTTATGGAGACATGAAATGTTACATTTTTCAACTAAATCCAAAGGCATCTATATTCAGGCCAACTGGAGCAAACACTAATCTACAATGGTGTGCTGTCAACTTTAGTTCAGAGGAAATTCCAAATGGCATTGGTTTTGGGGGACGAGAAAATCACTTTGGGTTATTTATCTCAGCAAACTTTGATCAAGGACATACATTTTCATGTTCTACATTTGGTAGCCCTTGCCTCTCCAAAACTAACCGTATAGTACCTGAAGTAATAGAATGCTGGGGAGTGACTCAAGGTGTGGTCCAAGGCAAGAATGATGCAGTTAAGGGAACTGTACTTGAGAGGTTTAAGGAAGATCGGCATATGCTCAACATGGTAGGGCTAGCAAATTCCAGCGAGTAA 1266 0.3878 MGNAQSPPTDPRYLSASRAFAQKGLENLKSLFDSLASQSHSNGKYITPSVFQSYFKLNGPIGERMFDLVTQERKDQKLTFEDLVITKATYEKGTKDEIEEFIFRLLDLSGDNFVGRSDLESVLIAIFNDILCIEGSEHGSSSHQDIVNIFLSAANFSIHDEKCTEEAMSFDDFRSWCTHLPTVRKLLGSLLLPPDSGRPGTQIPNLLTPKDIDSNIVLLRKEYAWHIGGALSQHELEDWMLLYHSSVNGLSFNTFLGNISNHEGPTVLILKDKDGYIYGGYASQQWERHAEFYGDMKCYIFQLNPKASIFRPTGANTNLQWCAVNFSSEEIPNGIGFGGRENHFGLFISANFDQGHTFSCSTFGSPCLSKTNRIVPEVIECWGVTQGVVQGKNDAVKGTVLERFKEDRHMLNMVGLANSSE* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3278 421 SMART 109ultra 216 385 IPR006571 -
Mtr7g3278 421 Pfam TLD 241 384 IPR006571 -
Mtr7g3278 421 SUPERFAMILY EF-hand 3 190 IPR011992 -
Mtr7g3278 421 ProSitePatterns EF-hand calcium-binding domain. 107 119 IPR018247 -
Mtr7g3278 421 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 413 - -
Mtr7g3278 421 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 1 413 - -
Mtr7g3278 421 ProSiteProfiles EF-hand calcium-binding domain profile. 94 129 IPR002048 GO:0005509
Mtr7g3278 421 ProSiteProfiles TLDc domain profile. 217 385 IPR006571 -
Mtr7g3278 421 Gene3D - 1 189 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3278 102 420 EF-hand Containing Proteins AT5G06260 60.870 1.25e-146 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3278 - - gmx:100804508 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3278 7 49863277 49867782 Mtr7g3278 7 49863277 49867782 ECH