Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3254 ATGTACTATAATGGATACTATCACCTATTCTACCAGTACAACCCAAAAGGATCTGTATGGGGAAACATTGTGTGGGCCCACTCAGTATCAAAGGATCTTATAAACTGGAAAGCACTTGAACCTGCTATCTACCCATCTAAACCCTTCGACAAATACGGATGTTGGTCCGGGTCAGCCACTATTGTTCCGGGTAAAGGACCAGTGATCCTTTACACCGGAATTATCGATGAAAAAAATACCCAAGTTCAAGTCTATGCGATACCCGAAGATCCAACCGACCCACTTCTTAGAAAATGGATAAAACCCGATGCGATCAACCCAATTGTGATTGCGGGACAAGGTGTTAATGGTAGCGCTTTTCGTGACCCAACAACTGCTTGGATGGGTAAAGATGGACGTTGGAGAATGTTGGTTGGTAGTAGAAGAAAACATAGAGGGATGGCCTACTTGTATAGGAGTAGGGATTTTGTGAAATGGGTTCGGGCCAAACACCCGATCCATTCAAAAACTACTACGGGTATGTGGGAGTGTCCTGATTTTTACCCGGTTTCACTTAAAGGTAAAGTAGGGTTGGATACATCAATTGAAGGTAATCATGTTAAGCATGTCTTAAAGAATAGTCTTGACATGACTAGATTTGAGTACTACACATTGGGCACATATTTAACTGATAAGGATAAGTATATTCCAAGTAATACTTCAGAGGATGGTTGGGGTGGACTTAGATATGACTATGGTAATTTCTATGCTTCCAAGTCATTTTTTGATCAAAGTAAGAATCGTAGGATACTTTGGGGTTGGGCTAATGAGTCTGATTCCCAGGATGATGATGTTAAAAAAGGATGGGCTGGAATTCAGGCAATTCCAAGAACTGTGTGGCTTGATCCTACTGAAAGACAATTAGTACAATGGCCTGTTGAAGAATTGAATGTACTAAGAGAGAAAGAAGTTAGTATGAACAATCAAAAGCTTGAAAAGGGTAATCATGTTGAAGTAGCTGGAATAACTGCTGCCCAGGTGGATGTGGAAGTTACTTTCTCATTTTCAAGCTTGGATAAGGCAGAGGCTTATGATCCAAGTTGGGTAAATGCACAAGACCTTTGTTCCCAAAAAGGTTCAAAAGTTCAAGGTGGTGTTGGACCTTTTGGTCTTTTGACTTTGGCTTCAGAAAATTTGGCAGAGTTCACTCCTGTATTCTTTAGAGTCTTCAAAGCTCCAAGTAAACATGTAGTTCTCTTGTGCTCTGATGCCACGAGTTCTTCTTTGACGAGTAACTTGTACAAGCCATCATTTGCTGGATTTGTAGATGTGGATTTTGCTACTAAAAAACTTTCTCTTAGGAGTTTGATTGATCATTCAGTGGTGGAAAGTTTTGGAGAAGGAGGTAAAACAAACATTTTGTCTAGGGTTTATCCAGTACTAGCCGTGGCAAATCAAGCTAATTTGTTTGTGTTTAACAATGGCACTGAACCGATCATTGTGGAGAATCTCAAAGCATGGAGTATGAAATCAGCTGAGCTGATATAA 1527 0.4034 MYYNGYYHLFYQYNPKGSVWGNIVWAHSVSKDLINWKALEPAIYPSKPFDKYGCWSGSATIVPGKGPVILYTGIIDEKNTQVQVYAIPEDPTDPLLRKWIKPDAINPIVIAGQGVNGSAFRDPTTAWMGKDGRWRMLVGSRRKHRGMAYLYRSRDFVKWVRAKHPIHSKTTTGMWECPDFYPVSLKGKVGLDTSIEGNHVKHVLKNSLDMTRFEYYTLGTYLTDKDKYIPSNTSEDGWGGLRYDYGNFYASKSFFDQSKNRRILWGWANESDSQDDDVKKGWAGIQAIPRTVWLDPTERQLVQWPVEELNVLREKEVSMNNQKLEKGNHVEVAGITAAQVDVEVTFSFSSLDKAEAYDPSWVNAQDLCSQKGSKVQGGVGPFGLLTLASENLAEFTPVFFRVFKAPSKHVVLLCSDATSSSLTSNLYKPSFAGFVDVDFATKKLSLRSLIDHSVVESFGEGGKTNILSRVYPVLAVANQANLFVFNNGTEPIIVENLKAWSMKSAELI* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3254 508 SMART glyco_32 1 462 IPR001362 GO:0004553|GO:0005975
Mtr7g3254 508 CDD GH32_Fruct1-like 1 294 - -
Mtr7g3254 508 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE PROTEIN 1 507 - -
Mtr7g3254 508 Pfam Glycosyl hydrolases family 32 C terminal 308 501 IPR013189 -
Mtr7g3254 508 Pfam Glycosyl hydrolases family 32 N-terminal domain 1 305 IPR013148 -
Mtr7g3254 508 SUPERFAMILY Arabinanase/levansucrase/invertase 1 306 IPR023296 -
Mtr7g3254 508 Gene3D Glycosyl hydrolase domain; family 43 1 318 IPR023296 -
Mtr7g3254 508 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 1 507 - -
Mtr7g3254 508 SUPERFAMILY Concanavalin A-like lectins/glucanases 305 505 IPR013320 -
Mtr7g3254 508 Gene3D - 319 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3254 Mtr-Chr7 49611940 49614248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3254 1 503 Glycoside Hydrolase AT3G52600 66.085 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3254 K01193 - gmx:100777418 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3254 7 49611940 49614248 Mtr7g3254 7 49611940 49614248 ECH