Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3247 ATGACAGAAGTGCTTCAATTTCCTTCACCTTCAAGCTGTTCTTCAAGTCCATTCAATGATGTGTCACACTCACAACACCACCAAACTAATTCTTCACCTTTTAACAACAGCGACAATGAAACCGTCATGACCCATTACCAGATTCAACAACAACAACAACAACAACAACAATCTGAAGACGAAGAAGAAGAGGAAAAAGATCAACTTTCTATTTTGACTCTTTTGATTGCTACGTTTAGGAAATCTTTGATTGGTTGTACCAACACTGGTTCTGAACTTTCTTCTTCAATGGAAATTGGTTGGCCTTCTAATGTTAGACATGTTGCTCATGTTACTTTTGATCGTTTTCATGGTTTTCTTGGTTTGCCTGTTGAATTTGAACCTGAAGTTCCAACAAGACCTCCTAGTGCTAGCACAAGTGTTTTTGGTGTTTCAACAGAATCTATGCAGCTTTCTTTTGATGCCAGAGGAAATAGTGTACCTACAATACTGCTGTTAATGCAAAGGCATCTGTATGCACAAGGAGGCCTGCAGGCCGAAGGAATCTTCAGAATTAATGCTGAAAATAGTCAAGAGGAGTTTGTGAGGGAACAATTGAACAGAGGAGTGGTACCAAATGGTATTGACGTGCATTGCTTGGCAGGTCTTATAAAGGCTTGGTTCAGAGAACTTCCAACTGGTATACTGGACCCTCTTTCGCCAGAGCAGGTGATGCAGTCCCAAACAGAAGAAGAATGTGCTCAGCTTGTGAGGCTTCTTCCTGCAACAGAATCCGCCCTCCTAGATTGGGCAGTAAACCTAATGGCAGACGTTGCTCAGATGGAACATTTGAACAAGATGAACGCACGTAATATTGCAATGGTTTTTGCACCAAACATGACTCACATGGTAGATCCTTTGACTGCTCTGATGTATGCTGTACAAGTCATGAATTTCCTCAAGACTCTAGTAGCAATGACACTGAAAGAAAGAGAGGAGTCAATCACAAAATCAAATCCCTCTTCAAACCTAAATTCTTTTGATGACGACGGGCATCAGAGCGATTCACCGTTGCTTTTCAAGGATGAAAGTGAATACGGAAATGATTACAGCGACGAGGACACAGTTTTTGTCACCGCCGAGCCTTCACAACAAAGCCCCACACATCTTTTTAAAGATGACTGTGAAACTGAGAGTGGATCCAAAAGTCTGCAAACATCTACCGAAAATTTTATTCCTAGTGGAAATAGGTTGCTGGTTGACAGTTGTCCTTGCGGCGTTGTCTCTCAAATTTGCTCTATGGCAATTGGGGATCAAACAAAAAATTGCAAAAGCCTTCAGTTGAATACTTCTGATACAGACAAGTGTTCAGCAGGATCGGTGGAGAAGAACAGGGGAATTGCTCTTATTGGACGAATAAATTCAAGATCCGAGTTGGCTGAAGCTTGGCGTTGA 1434 0.417 MTEVLQFPSPSSCSSSPFNDVSHSQHHQTNSSPFNNSDNETVMTHYQIQQQQQQQQQSEDEEEEEKDQLSILTLLIATFRKSLIGCTNTGSELSSSMEIGWPSNVRHVAHVTFDRFHGFLGLPVEFEPEVPTRPPSASTSVFGVSTESMQLSFDARGNSVPTILLLMQRHLYAQGGLQAEGIFRINAENSQEEFVREQLNRGVVPNGIDVHCLAGLIKAWFRELPTGILDPLSPEQVMQSQTEEECAQLVRLLPATESALLDWAVNLMADVAQMEHLNKMNARNIAMVFAPNMTHMVDPLTALMYAVQVMNFLKTLVAMTLKEREESITKSNPSSNLNSFDDDGHQSDSPLLFKDESEYGNDYSDEDTVFVTAEPSQQSPTHLFKDDCETESGSKSLQTSTENFIPSGNRLLVDSCPCGVVSQICSMAIGDQTKNCKSLQLNTSDTDKCSAGSVEKNRGIALIGRINSRSELAEAWR* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3247 477 Gene3D CRIB domain 94 128 IPR036936 -
Mtr7g3247 477 PANTHER RHO GTPASE-ACTIVATING PROTEIN 1 1 477 - -
Mtr7g3247 477 ProSiteProfiles CRIB domain profile. 99 112 IPR000095 -
Mtr7g3247 477 Pfam P21-Rho-binding domain 98 125 IPR000095 -
Mtr7g3247 477 Coils Coil 48 68 - -
Mtr7g3247 477 Pfam RhoGAP domain 161 295 IPR000198 GO:0007165
Mtr7g3247 477 SUPERFAMILY GTPase activation domain, GAP 138 317 IPR008936 GO:0007165
Mtr7g3247 477 ProSiteProfiles Rho GTPase-activating proteins domain profile. 144 328 IPR000198 GO:0007165
Mtr7g3247 477 MobiDBLite consensus disorder prediction 1 56 - -
Mtr7g3247 477 SMART RhoGAP_3 158 318 IPR000198 GO:0007165
Mtr7g3247 477 Gene3D Rho GTPase activation protein 132 331 IPR008936 GO:0007165
Mtr7g3247 477 SMART PBD_5 99 133 IPR000095 -
Mtr7g3247 477 CDD RhoGAP 161 316 - -
Mtr7g3247 477 CDD CRIB 97 137 - -
Mtr7g3247 477 MobiDBLite consensus disorder prediction 327 357 - -
Mtr7g3247 477 MobiDBLite consensus disorder prediction 330 345 - -
Mtr7g3247 477 MobiDBLite consensus disorder prediction 1 66 - -
Mtr7g3247 477 PANTHER MKIAA1688 PROTEIN 1 477 IPR044785 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3247 Mtr-Chr7 49547381 49553199 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3247 - - gmx:100783118 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3247 7 49547381 49553199 Mtr7g3247 7 49547381 49553199 ECH