Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3246 ATGGAAGCAGTACTAGCGTCCCGCCATTTGTCCACGCCACTCTCTCACCACCGAACCACCGCCTCTTCTTCGAGCAAGCTTTGTTCTTCCCTTTCTTATAGGAATTCTTTCGCGAAAGAGATATGGGGTTTTGTTCAGTCGAAAAGCGTAACTATGAGAAGAATGGATATGATTCGTCCAGTTGTGGTCAGAGCTGAAATGTTTGGTCAGTTAACTACTGGTCTTGAATCTGCCTGGAACAAACTCAAAGGAGAAGAGGTTTTGACCAAAGACAATATTGTGGAGCCTATGCGAGATATTAGGAGAGCTCTTTTAGAAGCTGATGTAAGTCTTCCTGTTGTAAGAAGGTTTGTGCAATCTGTTACTGATCAGGCTGTGGGTGTTGGAGTCACTCGAGGAGTCAAACCCGATCAACAATTGGTTAAGATTGTTCATGATGAACTTGTACAATTGATGGGTGGAGAGGTCTCGGAATTGACTTTTGCCAAAACTGGGCCCACTGTCATTTTATTGGCTGGACTCCAGGGAGTTGGGAAGACAACCGTGTGTGCAAAGTTAGCAAATTATTTCAAGAAACAGGGGAAGAGTTGCATGCTAGTTGCCGGGGATGTTTATAGACCTGCTGCTATCGACCAGCTTACTATCTTGGGTAAACAGGTGGACGTCCCTGTATATACAGCAGGTACCGATGTTAAACCATCAGACATTGCTAAACAAGGTTTTGAAGAGGCCAAAAAGAAGAAAATTGATGTGGTTATTGTTGACACTGCTGGTAGGCTGCAGATAGACAAAGCAATGATGGATGAGTTAAAAGATGTGAAACGGGTACTGAATCCAACAGAAGTCTTGTTAGTTGTGGATGCTATGACAGGGCAAGAAGCAGCAGCTTTGGTGACTACTTTCAATCTTGAGATTGGAATAACTGGTGCCATCTTGACAAAGCTAGATGGTGATTCAAGAGGTGGAGCAGCTTTGAGTGTCAAAGAGGTATCTGGAAAGCCAATTAAGTTGGTAGGACGCGGGGAACGCATGGAAGATCTTGAACCTTTCTACCCCGACCGAATGGCTGGGCGAATACTAGGAATGGGAGATGTCCTTTCATTTGTGGAGAAGGCACAAGAAGTTGTTACTCCTGCTCAAATTCGAGAAGCAGAGAGGAATTTGGAGATTATGGAAGTGATAATAAAAGCAATGACCCCTGAGGAAAGGGAAAAGCCAGAACTGTTGGCAGAATCCCCTGTTAGGAGGAAAAGAGTTGCTCAGGATTCAGGGAAAACAGAGCAGCAGGTAAGCCAACTTGTAGCTCAACTATTTCAAATGCGTGTTCGGATGAAGAACCTAATGGGTGTAATGGAAGGTGGATCGATGCCAACACTTAGTAATCTTGAGGAAGCACTTAAAACAGAGGAAAAGGCTCCACCTGGCACTGCAAGGAGGAGAAAGAAAGCAGAGTCAAGGAGGTTATTTGCAGACTCAACGTTAAGGCAACCTCCTCGTGGATTTGGGAGCAAAAACTGA 1518 0.4466 MEAVLASRHLSTPLSHHRTTASSSSKLCSSLSYRNSFAKEIWGFVQSKSVTMRRMDMIRPVVVRAEMFGQLTTGLESAWNKLKGEEVLTKDNIVEPMRDIRRALLEADVSLPVVRRFVQSVTDQAVGVGVTRGVKPDQQLVKIVHDELVQLMGGEVSELTFAKTGPTVILLAGLQGVGKTTVCAKLANYFKKQGKSCMLVAGDVYRPAAIDQLTILGKQVDVPVYTAGTDVKPSDIAKQGFEEAKKKKIDVVIVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVVTPAQIREAERNLEIMEVIIKAMTPEEREKPELLAESPVRRKRVAQDSGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSMPTLSNLEEALKTEEKAPPGTARRRKKAESRRLFADSTLRQPPRGFGSKN* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3246 505 PANTHER BNAC02G02820D PROTEIN 376 503 - -
Mtr7g3246 505 PANTHER BNAC02G02820D PROTEIN 45 376 - -
Mtr7g3246 505 SUPERFAMILY Signal peptide-binding domain 361 447 IPR036891 GO:0006614|GO:0008312|GO:0048500
Mtr7g3246 505 MobiDBLite consensus disorder prediction 459 505 - -
Mtr7g3246 505 MobiDBLite consensus disorder prediction 404 426 - -
Mtr7g3246 505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 363 IPR027417 -
Mtr7g3246 505 Pfam SRP54-type protein, helical bundle domain 71 148 IPR013822 GO:0005525|GO:0006614
Mtr7g3246 505 SMART AAA_5 165 312 IPR003593 -
Mtr7g3246 505 MobiDBLite consensus disorder prediction 464 489 - -
Mtr7g3246 505 SUPERFAMILY Domain of the SRP/SRP receptor G-proteins 66 159 IPR036225 -
Mtr7g3246 505 Pfam Signal peptide binding domain 361 442 IPR004125 GO:0006614|GO:0008312|GO:0048500
Mtr7g3246 505 ProSitePatterns SRP54-type proteins GTP-binding domain signature. 334 347 IPR000897 GO:0005525|GO:0006614
Mtr7g3246 505 CDD SRP_G 167 359 - -
Mtr7g3246 505 Gene3D - 156 350 IPR027417 -
Mtr7g3246 505 PANTHER SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54 45 376 IPR022941 GO:0003924|GO:0005525|GO:0006614|GO:0048500
Mtr7g3246 505 PANTHER SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54 376 503 IPR022941 GO:0003924|GO:0005525|GO:0006614|GO:0048500
Mtr7g3246 505 Gene3D - 70 371 IPR042101 -
Mtr7g3246 505 Pfam SRP54-type protein, GTPase domain 166 361 IPR000897 GO:0005525|GO:0006614
Mtr7g3246 505 Gene3D - 379 448 IPR036891 GO:0006614|GO:0008312|GO:0048500
Mtr7g3246 505 SMART SRP54_N_2 67 152 IPR013822 GO:0005525|GO:0006614
Mtr7g3246 505 MobiDBLite consensus disorder prediction 404 423 - -
Mtr7g3246 505 SMART SRP54_3 166 361 IPR000897 GO:0005525|GO:0006614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3246 Mtr-Chr7 49539010 49546319 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3246 K03106 - gmx:100782581 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3246 7 49539010 49546319 Mtr7g3246 7 49539010 49546319 ECH