Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3235 ATGAAAAAGCATTTACTAAAACCAATAACAAAACCACCACCACCAATCCTCAACCCACCACCACCACCACCGCCACCAACAACAACCACATCACTCTTCCCTCCAACACTCTCCCCCACCCAACACTACACCCACTTTCTCCACTTCCTCAACCACCACCTCACTCCACCTCTCACCCCACAAACCCTAACCCACTTCCTCAAATCCAAACTCCACCACCACCCTTCCTTCACCCACTTCGACTTCCATCTCTTCTCTTGGGCTTCCACCCTCGACACATTCTCTCACAACCACACCTCCTACGAATGGATGACACGTACCCTTGCTCTCTCTCATCGTTTCTCTCTCCTCCGCACCCTCCTCACTTTCATCTCCACCAACCCCTGCCAATGCTCTCAAGCCATCTTCTCTTGCCCACAAACCGAACCCATTTTCCGTTTTGCAATTCAGTATTACTGTAAAGCTTTCAAATTTGATGATGCTGTTTATGCTTTTAATGTTATGCGCAGGTTAATTGACGGAAAACCGAGTGTTTCGGTTTGTAATATTTTGATTCATGGGTTTGTTAAATCTGGTAGATTTGATAGAGCTTTTGAGTTTTATAATCAGATGGTTAAGGATAGGATTAAGCCTGATGTGTTTACTTTTAATATTTTGATTAGTGGTTATTGTAGGGATTTTAAATTTGGTTTTGCATTGGAGATGTTTGATGAAATGAGGAAAATGGGGTGTCATCCAAATGTTGTTACTTTTAATACTTTGATTAAAGGGTTGTTTAGGGAATGTAGAGTTGATGAAGGGATTGGGATGGTTTATGAGATGATTGAATTGGGATGTCAGCTTTCTGATGTTACTTGTGAGATTTTGGTTGATGGGCTTTGTAAGGAAGGGAGGGTTTCGCAGGTGTGTGATTTGTTGATGGAGTTTTCTAAGAGAGGGGTTTTGCCTAAAGGTTATGATTATTTTGTTTTGGTGGAAATTTTGTGTGGGAAAGGAGAGGCTTTTAAAGCTTTAGAGGTTATTTATGAGTTGTGGAGCAAAGGATGTGTCCCTAGCTTGATTTCTTGTATTGTAATGATTGATGGTTTGAGAGGATTGGGGAAGATTGAAGAGGCAATGAGATTGGTTGAAAAAATGCTTAAAGAGGAGGGTATGGTACTTGATGTTGTGACTTTCAATTCTGTCCTTCAAGATCTTTGTGATGCGGGAAGGACTGAAGATGCAAATAGGTTGAGATTACTTGCTTCTAGCAAGGGTTTGGAACCCGATGCCATGACTTATAAAATTCTGGTTGCTGGGTATAGAGGAGAGGGAAATCAATCGGAAGGAGAGTTAGTGGTAAATGAAATGTTGGATAAGGGGTTTATACCTGATCTTGCTTCATATAATAAATTGATGGATGCACTATCTAATTGTCAACGCCCCAACCGTTATCAAGCGAACCAAATTGGCAGGTGA 1458 0.415 MKKHLLKPITKPPPPILNPPPPPPPPTTTTSLFPPTLSPTQHYTHFLHFLNHHLTPPLTPQTLTHFLKSKLHHHPSFTHFDFHLFSWASTLDTFSHNHTSYEWMTRTLALSHRFSLLRTLLTFISTNPCQCSQAIFSCPQTEPIFRFAIQYYCKAFKFDDAVYAFNVMRRLIDGKPSVSVCNILIHGFVKSGRFDRAFEFYNQMVKDRIKPDVFTFNILISGYCRDFKFGFALEMFDEMRKMGCHPNVVTFNTLIKGLFRECRVDEGIGMVYEMIELGCQLSDVTCEILVDGLCKEGRVSQVCDLLMEFSKRGVLPKGYDYFVLVEILCGKGEAFKALEVIYELWSKGCVPSLISCIVMIDGLRGLGKIEEAMRLVEKMLKEEGMVLDVVTFNSVLQDLCDAGRTEDANRLRLLASSKGLEPDAMTYKILVAGYRGEGNQSEGELVVNEMLDKGFIPDLASYNKLMDALSNCQRPNRYQANQIGR* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3235 485 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 423 457 IPR002885 -
Mtr7g3235 485 PANTHER FERTILITY RESTORER HOMOLOGUE A-LIKE 4 473 - -
Mtr7g3235 485 Gene3D Tetratricopeptide repeat domain 137 263 IPR011990 GO:0005515
Mtr7g3235 485 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 282 316 IPR002885 -
Mtr7g3235 485 TIGRFAM PPR: pentatricopeptide repeat domain 180 213 IPR002885 -
Mtr7g3235 485 TIGRFAM PPR: pentatricopeptide repeat domain 355 389 IPR002885 -
Mtr7g3235 485 TIGRFAM PPR: pentatricopeptide repeat domain 284 316 IPR002885 -
Mtr7g3235 485 TIGRFAM PPR: pentatricopeptide repeat domain 214 248 IPR002885 -
Mtr7g3235 485 TIGRFAM PPR: pentatricopeptide repeat domain 249 282 IPR002885 -
Mtr7g3235 485 Gene3D Tetratricopeptide repeat domain 383 482 IPR011990 GO:0005515
Mtr7g3235 485 MobiDBLite consensus disorder prediction 8 32 - -
Mtr7g3235 485 Pfam PPR repeat family 211 259 IPR002885 -
Mtr7g3235 485 Pfam PPR repeat family 388 434 IPR002885 -
Mtr7g3235 485 PANTHER ATPASE EXPRESSION PROTEIN 3 4 473 - -
Mtr7g3235 485 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 177 211 IPR002885 -
Mtr7g3235 485 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 388 422 IPR002885 -
Mtr7g3235 485 Pfam PPR repeat 357 382 IPR002885 -
Mtr7g3235 485 Pfam PPR repeat 180 208 IPR002885 -
Mtr7g3235 485 Pfam PPR repeat 284 314 IPR002885 -
Mtr7g3235 485 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 247 281 IPR002885 -
Mtr7g3235 485 MobiDBLite consensus disorder prediction 1 34 - -
Mtr7g3235 485 Gene3D Tetratricopeptide repeat domain 264 382 IPR011990 GO:0005515
Mtr7g3235 485 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 212 246 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3235 183 483 Miscellaneous Gene Families AT4G11690 30.897 1.73e-46 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3235 - - aprc:113860936 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3235 7 49427419 49429404 Mtr7g3235 7 49427419 49429404 ECH