Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3207 ATGGTTTATACCATTTCTGGAATTCGATTTCCCGTTGTTCCTTCTCTGAATAAGTCCAGCTTACGTGGTGGCGATCGCAGAACTTCTTCTTCTCACTCCTTCTTTCTCAAGAAGAATTCATCATCATTCTCGAAGACTTCACTATATGCAAAGTTTTCCCATGATTCTGAAACCAAATCTTCCACAATTGCTGAATCTGATAAAGTACTTATTCCAGAAGATCAAGATAACTCTGCATCCGTGACGGATCAACTTGAAAATCCTGATATAACCTCAGAGGATGCACAGAACTTGGAGGATTTAACCATGAAAGATGAGAATAAGTACAATGTTGATGAAGCAGCTAGCAGTTATAGAGAGGTCGGGGATGACAAAGGTTCTGTTATGCCATCATCACTTGTGGATGTTAAAACTGACGCTCAAGCCAAGAAGACATCAGTTCATTCAGACAAGAAAGTAAAAACAGATAAACCTAAGGTCATTCCTCCACCTGGTGCTGGACAGAAAATATATGAGATTGATACATTTTTACAAGCACACCGTCAGCATCTTGATTTCCGCTATGGACAGTACAAAAAAATTCGGGAGGAAATTGACAAGTATGAAGGTGGTCTTGATGCATTTTCTCGTGGGTACGAAAAGTTAGGCTTCACACGCAGTGCTACAGGCATTACTTACAGAGAGTGGGCACCTGGAGCTAAGTCAGCAGCATTAGTTGGAGATTTCAATAATTGGAATCCAAATGCAGATGTAATGACCCGGGACGATTTTGGTGTGTGGGAGATCTTCTTGCCAAATAATGCCGATGGTTCACCACCAATTCCTCATGGTTCTCGAGTCAAGATCCACATGGATACACCCTCTGGGATCAAGGACTCAATTCCTGCTTGGATCAAATTCTCTGTACAGGCTCCTGGTGAAATTCCATATAATGGAATATACTATGATCCCCCAGAGGAGGAAAAATATGTCTTCAAACATCCACAGCCAAAGCGACCGCAATCAATTAGGATATATGAGGCACATGTTGGAATGAGTAGCCCAGAGCCAAAAATCAACACATATGCCAATTTTAGAGATGATGTACTGCCTCGCATTAAAAAGCTTGGCTATAATGCTGTCCAGATTATGGCTATCCAAGAACATTCTTACTATGCTAGCTTTGGGTACCATGTTACTAATTTCTTTGCACCTAGCAGTCGGTTTGGAACTCCAGAAGATCTTAAGTCTCTGATAGACAGAGCCCATGAACTAGGCCTGCTTGTTCTGATGGATATTGTACATAGCCATGCATCAAGTAATACATTGGATGGCCTCAACATGTTTGATGGAACCGATGCTCATTATTTCCATTCTGGTTCACGGGGTTATCATTGGATGTGGGATTCTCGCCTTTTTAACTATGGAAGCTGGGAAGTCCTAAGGTATCTACTTTCAAATGCTAGATGGTGGCTGGATGAATATAAGTTTGATGGGTTTCGATTTGATGGTGTCACATCAATGATGTACACTCATCATGGACTGCAGGTATCTTTTACTGGAAATTACAATGAGTATTTTGGTTTTGCAACTGATGTTGAAGCTGTGGTTTACCTGATGCTTGTTAATGATCTCATTCATGGGCTCTATCCTGAAGCTGTTTCAATTGGTGAAGATGTGAGTGGAATGCCAACATTCTGCCTTCCAACACAAGATGGTGGGATTGGCTTTAACTATCGCTTGCATATGGCCGTTGCAGACAAGTGGATTGACCTTCTTAAGAAAAAGGATGAAGATTGGAGAATGGGTGATATAGTCCACACACTGACAAACAGAAGGTGGCTAGAAAATTGTGTGGTTTATGCTGAAAGTCATGACCAAGCCTTGGTTGGTGACAAGACACTAGCATTTTGGTTGATGGACAAGGATATGTATGACTTCATGGCTTTAGACAGACCATCTACTCCTCTAATCGATCGTGGTATTGCATTACACAAAATGATTAGGCTTATTACTATGGGCCTTGGTGGTGAAGGGTATTTAAATTTTATGGGGAATGAATTCGGCCATCCTGAGTGGATCGATTTTCCAAGGGGTGATCAACATCTTCCTAATGGCACAGTAGTTCCTGGGAATAACAACAGTTATGATAAATGCAGGCGTAGATTTGACTTGGGTGATGCAGAATATCTAAGATATCATGGAATGCAAGAATTTGATCGAGCTATGCAGCACCTAGAAGAAAGATATGGTTTCATGATTTCTGAGCACCAATATATTTCAAGGAAAAATGAAGGTGACAGAGTTATAATCTTTGAAAGGGACAACCTGGTCTTTGTATTCAATTTTCACTGGACCAACAGTTATTCAGATTACAAAGTTGGCTGTTTAAAGCCAGGGAAATATAAGATTGTCTTGGATTCAGATGAGTCCTTGTTTGGTGGCTTCAATAGGCTCAATCATACTGCTGAGTACTTCACTTCGGAAGGATGGTATGATGACCGGCCTCGTTCCTTCCTCGTTTATGCACCTTGTAGAACAGCAGTGGTATATGCTCTTGTAGATGGAGTTGAATCAGAGCCGGTTGAACTGTCAGTTGGAGTTGAATCAGAGACAATTCAACAATCAGTTGAAGTTGAACCCTGA 2625 0.4114 MVYTISGIRFPVVPSLNKSSLRGGDRRTSSSHSFFLKKNSSSFSKTSLYAKFSHDSETKSSTIAESDKVLIPEDQDNSASVTDQLENPDITSEDAQNLEDLTMKDENKYNVDEAASSYREVGDDKGSVMPSSLVDVKTDAQAKKTSVHSDKKVKTDKPKVIPPPGAGQKIYEIDTFLQAHRQHLDFRYGQYKKIREEIDKYEGGLDAFSRGYEKLGFTRSATGITYREWAPGAKSAALVGDFNNWNPNADVMTRDDFGVWEIFLPNNADGSPPIPHGSRVKIHMDTPSGIKDSIPAWIKFSVQAPGEIPYNGIYYDPPEEEKYVFKHPQPKRPQSIRIYEAHVGMSSPEPKINTYANFRDDVLPRIKKLGYNAVQIMAIQEHSYYASFGYHVTNFFAPSSRFGTPEDLKSLIDRAHELGLLVLMDIVHSHASSNTLDGLNMFDGTDAHYFHSGSRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLDEYKFDGFRFDGVTSMMYTHHGLQVSFTGNYNEYFGFATDVEAVVYLMLVNDLIHGLYPEAVSIGEDVSGMPTFCLPTQDGGIGFNYRLHMAVADKWIDLLKKKDEDWRMGDIVHTLTNRRWLENCVVYAESHDQALVGDKTLAFWLMDKDMYDFMALDRPSTPLIDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPEWIDFPRGDQHLPNGTVVPGNNNSYDKCRRRFDLGDAEYLRYHGMQEFDRAMQHLEERYGFMISEHQYISRKNEGDRVIIFERDNLVFVFNFHWTNSYSDYKVGCLKPGKYKIVLDSDESLFGGFNRLNHTAEYFTSEGWYDDRPRSFLVYAPCRTAVVYALVDGVESEPVELSVGVESETIQQSVEVEP* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3207 874 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 214 297 IPR004193 GO:0004553|GO:0005975
Mtr7g3207 874 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 2-1, CHLOROPLASTIC/AMYLOPLASTIC 10 852 - -
Mtr7g3207 874 SUPERFAMILY (Trans)glycosidases 326 743 IPR017853 -
Mtr7g3207 874 MobiDBLite consensus disorder prediction 144 165 - -
Mtr7g3207 874 CDD AmyAc_bac_euk_BE 319 734 - -
Mtr7g3207 874 Gene3D Immunoglobulins 210 322 IPR013783 -
Mtr7g3207 874 SUPERFAMILY E set domains 208 317 IPR014756 -
Mtr7g3207 874 MobiDBLite consensus disorder prediction 144 158 - -
Mtr7g3207 874 Pfam Alpha amylase, catalytic domain 363 435 IPR006047 GO:0005975
Mtr7g3207 874 PIRSF GlgB 90 855 IPR037439 GO:0003844|GO:0005978
Mtr7g3207 874 CDD E_set_GBE_euk_N 222 315 - -
Mtr7g3207 874 MobiDBLite consensus disorder prediction 73 91 - -
Mtr7g3207 874 Gene3D - 748 854 IPR013780 -
Mtr7g3207 874 SUPERFAMILY Glycosyl hydrolase domain 749 847 - -
Mtr7g3207 874 MobiDBLite consensus disorder prediction 61 91 - -
Mtr7g3207 874 Pfam Alpha amylase, C-terminal all-beta domain 752 846 IPR006048 GO:0003824|GO:0005975|GO:0043169
Mtr7g3207 874 SMART aamy 353 713 IPR006047 GO:0005975
Mtr7g3207 874 Gene3D Glycosidases 174 743 - -
Mtr7g3207 874 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 10 852 IPR037439 GO:0003844|GO:0005978
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3207 Mtr-Chr7 49117981 49142562 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3207 1 840 Glycoside Hydrolase AT2G36390 75.237 0.0 1307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3207 K00700 - gmx:100785968 1523.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3207 7 49117981 49142562 Mtr7g3207 7 49117981 49142562 ECH