Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3197 ATGTATGCAACACATAAGCTTCATTTCACAAATATTATTCTCGTTCTAGTCTTTTCTACCACCTTAACATCTTTAGCAACAACCACCACCACTTCCATCCCACAAGAGCTTCTCAAAGGCTTTTCCTCATCTCCACTCTCAACATCCACCTCCTTTCAACCCATCCTCACCGATCCTACCGGAAACTTCTCTCTCGGGTTCCTCCGCCACAACCAAAACGACCTAAAACTCGCCGTCGTTCACACCCTTTCCCTTGAACCACTATGGACAGCCAACCCAACCCACACAGTATCTTGGTCCCACACCACGCGCCTCTTCTTCAATGGCAGTCTTGTTTTGTGGGACCCACAAAGAACCCTATCATGGTCAACAACCACCAACGGTGAGCGCGTGGTTCTTCTCAATACCTCAAACTTACAAGTACAATCAAAAACACCACTTTGGGAAAGTTTCCATTTTCCTACAAACACCCTCGTTCAAGATCAAAACTTCACTTCAAACATGTCTCTAGTATCAACCAACAATCTCTACTCGTTACGTTTAGGTGACACATTCATGGGTTTATACGAAAATCACGACAAAGAAAAAGGTAGTTTGTTAACAAAACGGTTAGTTTTGTTATATTGGAAACGTTCTGCACTACAAGCAAAATCTACAATCATAGAAGGTGATGGACCTATTTACGCAAGAGTAAGCACCGAAGGTTATATTGGAATGTACCAAACAAGTTATAAACCTGCTGATGTTCAGAAATTCAACAGTTTTCAAGAAACTTCGTCGTTTCTTTTGGTTAGGTTAGAACAAGACGGGAATCTCAAAGGGTATTATTGGGATTCAACAAAGTCTAGTTGGATACTTAACTTCCAAGCTATTAGTGAAACTTGCGAGCTTCCAAATCCATGTGGTTCGTATGGTTTGTGTACTCCGGGTGGGTCTAGTTGTTCTTGTTTAGATAACAAAGCTAGGTTTGAACCGGGTGGGTGTTTTAATGATGATGATGGTGATGGAGGTGGAGACTTATGCAGTGGAGGGATTGGTGAAGAGAATAGTTACAAGATTCTGAGAAAGGTTGGAGTGGAGCCACCGCATAAAGAGTTACTAGAGGAAGTAACAACGTTATCTTTAACAGAATGTGAGGGTTTGTGTGAGAAAAATTGTAAATGTTGGGGAGCTTTGTATAATAACCAAACCGGGTTTTGTTATGTTTTGGATTATACAATAGGAACAATGTTAGGAACAGGGGATGAGTCAAAGGTGGGTTATTTTAAAGTGAGGAAAGGTGCACGGAGAAGGAATAGGGTAGGGGTTATTGTTGGAATCGTGGTTTCTGTTTTGGTTGGGATAGTTGTTGTTGGTGTTGTGATTTGTGTAGTGAGGTGGAAAAAGAGAAAAGGGGGTATGAAAGAGGAGGATGAGAATTGGGCTTTGCCTGGCCCGTATAGGAATCTTGGATCCGAAAGTTTTAGATCCGTTGAGATGTCGAGTACGAGTAGTGCGCATTAA 1503 0.4185 MYATHKLHFTNIILVLVFSTTLTSLATTTTTSIPQELLKGFSSSPLSTSTSFQPILTDPTGNFSLGFLRHNQNDLKLAVVHTLSLEPLWTANPTHTVSWSHTTRLFFNGSLVLWDPQRTLSWSTTTNGERVVLLNTSNLQVQSKTPLWESFHFPTNTLVQDQNFTSNMSLVSTNNLYSLRLGDTFMGLYENHDKEKGSLLTKRLVLLYWKRSALQAKSTIIEGDGPIYARVSTEGYIGMYQTSYKPADVQKFNSFQETSSFLLVRLEQDGNLKGYYWDSTKSSWILNFQAISETCELPNPCGSYGLCTPGGSSCSCLDNKARFEPGGCFNDDDGDGGGDLCSGGIGEENSYKILRKVGVEPPHKELLEEVTTLSLTECEGLCEKNCKCWGALYNNQTGFCYVLDYTIGTMLGTGDESKVGYFKVRKGARRRNRVGVIVGIVVSVLVGIVVVGVVICVVRWKKRKGGMKEEDENWALPGPYRNLGSESFRSVEMSSTSSAH* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3197 500 CDD EGF_CA 295 316 - -
Mtr7g3197 500 PIRSF SLG 3 438 IPR035446 -
Mtr7g3197 500 Pfam PAN domain 368 409 IPR003609 -
Mtr7g3197 500 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 282 IPR036426 -
Mtr7g3197 500 Gene3D - 50 196 - -
Mtr7g3197 500 Pfam S-locus glycoprotein domain 253 318 IPR000858 GO:0048544
Mtr7g3197 500 PANTHER OS11G0149900 PROTEIN 36 485 - -
Mtr7g3197 500 ProSiteProfiles PAN/Apple domain profile. 341 426 IPR003609 -
Mtr7g3197 500 PANTHER - 36 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3197 Mtr-Chr7 48953162 48954664 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3197 - - cam:101498584 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3197 7 48953162 48954664 Mtr7g3197 7 48953162 48954664 ECH