Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3162 ATGGCGAGCGGTAGTAGTAGTAGAAAATCTCGAAGACGAAGAAGATCCGATGATGACTCTGCATCTGACTCCGACTCCGACCACCGCCGGAAAACTAGTCGCCGGTCACGCCGAGATTCAGATGATGATTCAAGTGACGACAACGTTAATAGAACTGGAAGAAAGAAGAAATCTTCCAGAACAATCACAGAAGAGGAAATTTCACAGTATATGGCTAAAAAAGCTCAGAGAAAGGCTACGAAAGTTGCTAAGAAATTGAAGACGAATACAGTATCGGGTTATTCCAATGATTCTAATCCGTTTGGTGATACTAATCTCAATGAAAAGTTTGTTTGGCGTAAGAAGATTGAGCGCGATGTTACTCAAGGTGTATCGATTGATTCCTTTTCTGTTAAAGCTGAGAAGAAAAGACAAGTGGAAAGGATGGCAGAAATTGAAAAGGTGAAAAAGAGGAGAGAGGAAAGGGCACTTGAGAAAGCACAACATGAAGAAGAAATGGCATTGTTAGCTAGAGAACGTGCTCGAGCTGAGTTCCAGGACTGGGAAAAAAAGGAAGAGGAGTTCCATTTTGATCAAAGCAAAGTCAGGTCAGAGATTAGATTGCGTGAAGGGCGTGCCAGGCCAATTGATGTCCTAACCAAGCACCTCAATGGCTCTGATGATTTGGATATAGAAATAAATGAACCATATATGGTCTTCAAGGGTTTGACGGTTAAAGAAATGAGTGAACTTCGTGACGACATCAAAATGCATCTTGATCTTGATAGGGCAACACCAACCCATGTGGAATATTGGGAGGCTCTCCTTGTGGTGTGCGATTGGGAGCTAGCTGAATCTCGAAAAAAGGATGCAATTGATCGAGCTAGGGTGCGTGGAGAAGAACCTCCTGCTGAGCTGCTTGCTGAACAAAGGGGTCTGCATTCCAGTGTTGAGCCAGATGTGAAGGACCTTTTACATGGAAAGACACGTACAGAGTTGGAAGCCTTACAGGCTCACATTGAGTCAGAGATGCGTACTGGTACAGCAAAGGTGGTTGAGTACTGGGAGGCCATTTTAAAACACCTCCACATATACAAGGCCAAGGCTTGTTTAAAGGAGATCCATGCTAAAATGTTACGTAAGCATTTGCAACGTCTTGAGCAACCATTGGAGGATGAAGATAAACCGGAGCGTGCTCTTGACATGATACCTGAGGAGGCATATACTGAGGATGAGGAGGATGAGGATGCTAAAGTAGTCCGTTCTGCAGATGAATCGTTTTCACCAGAGCCCGTTAGAGAGAATCAAGAAGCTGAAGATGAGGCTGGATCATTTTCACCACAACTGTTGCATGATGATGAAAATGAGGAAGCTATTGATCCTGAAGAGGACAAAGCTATACTGGAGCGGAAACGTATGGCTGTAATGGAAGAGCAGCAAAGACGGATTCAGGAAGCAATGGCATCAAAGCCAGCTCCATCTGAAGATAATTTAGAGTTGAAAGCCTTTAAAGCTATGGGAGCTATGGAGGATGGAGACGCAGTGTTTGGATCTGGAGCTGAAGTGAGCCTTGATTCACAGGTTTATTGGTGGCATGACAAGTACAGACCAAGGAAGCCAAAGTATTTCAACCGCGTTCACACTGGATATGAGTGGAACAAATATAACCAGACTCACTATGATCATGACAACCCACCTCCAAAGATTGTGCAAGGGTACAAATTTAATATTTTCTATCCCGATCTTGTAGACAAGATAAAAGCCCCAAACTACACTATAGAGAAAGACGGCAGCAATGGGGAGACATGCATTATTAGATTCCATGCAGGACCACCATATGAAGATATAGCTTTCCGCATTGTAAACAAAGAATGGGAATACTCTCACAAGAAAGGTTTTAAATGCACATTTGAACGTGGAATTCTGCACGTGTACTTCAATTTCAAACGCCACCGCTACCGCCGATAA 1947 0.4355 MASGSSSRKSRRRRRSDDDSASDSDSDHRRKTSRRSRRDSDDDSSDDNVNRTGRKKKSSRTITEEEISQYMAKKAQRKATKVAKKLKTNTVSGYSNDSNPFGDTNLNEKFVWRKKIERDVTQGVSIDSFSVKAEKKRQVERMAEIEKVKKRREERALEKAQHEEEMALLARERARAEFQDWEKKEEEFHFDQSKVRSEIRLREGRARPIDVLTKHLNGSDDLDIEINEPYMVFKGLTVKEMSELRDDIKMHLDLDRATPTHVEYWEALLVVCDWELAESRKKDAIDRARVRGEEPPAELLAEQRGLHSSVEPDVKDLLHGKTRTELEALQAHIESEMRTGTAKVVEYWEAILKHLHIYKAKACLKEIHAKMLRKHLQRLEQPLEDEDKPERALDMIPEEAYTEDEEDEDAKVVRSADESFSPEPVRENQEAEDEAGSFSPQLLHDDENEEAIDPEEDKAILERKRMAVMEEQQRRIQEAMASKPAPSEDNLELKAFKAMGAMEDGDAVFGSGAEVSLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKIKAPNYTIEKDGSNGETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRHRYRR* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3162 648 MobiDBLite consensus disorder prediction 398 456 - -
Mtr7g3162 648 MobiDBLite consensus disorder prediction 407 447 - -
Mtr7g3162 648 MobiDBLite consensus disorder prediction 1 105 - -
Mtr7g3162 648 MobiDBLite consensus disorder prediction 85 105 - -
Mtr7g3162 648 PANTHER POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 31 648 - -
Mtr7g3162 648 Pfam Conserved mid region of cactin 171 368 IPR018816 -
Mtr7g3162 648 MobiDBLite consensus disorder prediction 11 63 - -
Mtr7g3162 648 SMART CactinC_cactus_3 524 648 - -
Mtr7g3162 648 PANTHER BNAC05G02180D PROTEIN 31 648 - -
Mtr7g3162 648 Coils Coil 143 179 - -
Mtr7g3162 648 Pfam Cactus-binding C-terminus of cactin protein 524 648 IPR019134 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3162 Mtr-Chr7 48612819 48621459 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3162 K25058 - gmx:100780087 1067.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3162 7 48612819 48621459 Mtr7g3162 7 48612819 48621459 ECH